Evidence map›Paper›PMID 41520856›Full record

ArticleMolecular & cellular proteomics : MCP2026

Higher-Throughput Proteome Profiling Enabled by Parallelized Pre-Accumulation and Optimized Ion Processing in the Orbitrap Astral Zoom Mass Spectrometer.

Ulises H Guzman, Martin Rykær, Ivo A Hendriks, Hamish Stewart, Eduard Denisov, Bernd Hagedorn, Johannes Petzoldt, Arne Kreutzmann, Yannick Mueller, Tabiwang N Arrey and 12 more

Abstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Enrichment-free deep proteomics enables proteome-scale analysis of methionine oxidation.DNA research : an international journal for rapid publication of reports on genes and genomes · 2026
    Article
  2. Mass spectrometry proteomics for studying mitostasis.Protein science : a publication of the Protein Society · 2026
    Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Ulises H GuzmanDepartment of Cellular and Molecular Medicine, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Martin RykærDepartment of Cellular and Molecular Medicine, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Ivo A HendriksDepartment of Cellular and Molecular Medicine, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Hamish StewartThermo Fisher Scientific, Bremen, Germany.
Eduard DenisovThermo Fisher Scientific, Bremen, Germany.
Bernd HagedornThermo Fisher Scientific, Bremen, Germany.
Johannes PetzoldtThermo Fisher Scientific, Bremen, Germany.
Arne KreutzmannThermo Fisher Scientific, Bremen, Germany.
Yannick MuellerThermo Fisher Scientific, Bremen, Germany.
Tabiwang N ArreyThermo Fisher Scientific, Bremen, Germany.
Immo ColoniusThermo Fisher Scientific, Bremen, Germany.
Ole ØstergaardDepartment of Cellular and Molecular Medicine, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Claire KoenigDepartment of Cellular and Molecular Medicine, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Julia KraegenbringThermo Fisher Scientific, Bremen, Germany.
Kyle L FortThermo Fisher Scientific, Bremen, Germany.
Erik CouzijnThermo Fisher Scientific, Bremen, Germany.
Jan-Peter HauschildThermo Fisher Scientific, Bremen, Germany.
Daniel HermansonThermo Fisher Scientific, Bremen, Germany.
Vlad ZabrouskovThermo Fisher Scientific, Bremen, Germany.
Christian HockThermo Fisher Scientific, Bremen, Germany.
Eugen DamocThermo Fisher Scientific, Bremen, Germany.
Jesper V OlsenDepartment of Cellular and Molecular Medicine, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. Electronic address: jesper.olsen@cpr.ku.dk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-throughput proteomics is critical for understanding biological processes, enabling large-scale studies such as biomarker discovery and systems biology. However, current mass spectrometry technologies face limitations in speed, sensitivity, and scalability for analyzing large sample cohorts. The Thermo Scientific Orbitrap Astral Zoom mass spectrometer (MS) was developed to address these limitations by improving acquisition speed, ion utilization, and spectral processing, which are all essential for advancing proteome depth in high-throughput proteomics. The Orbitrap Astral Zoom MS achieves ultra-fast MS/MS scan rates of up to 270 Hz with enhanced ion utilization through pre-accumulation, enabling the identification of ∼100,000 unique peptides and >8400 proteins in a single 300 samples-per-day analysis of human cell lysate. The optimized system reduces analysis time by 40%, achieves near-complete proteome coverage (>12,000 proteins) in 2.7 h, and enables ultra-high-throughput workflows, identifying >7000 proteins in a 500 samples-per-day method with exceptional reproducibility (pairwise Pearson correlations >0.99). These advancements establish the Orbitrap Astral Zoom MS among the fastest and most sensitive instruments under the tested conditions, significantly enhancing speed, sensitivity, and scalability, paving the way for routine large-scale proteomics with applications in clinical research and systems biology.

Indexed as

Mass SpectrometryProteomicsAtlases as TopicCell LineHumansSoftwareenhanced dynamic range scansevosep ENOhigh-throughput proteomicsnarrow-window DIAOrbitrap Astral Zoom

Identifiers

PMID41520856
PMCPMC12914409

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.