Evidence map›Paper›PMID 41520089›Full record

ArticleApplied microbiology and biotechnology2026

Genome sequence of Halovibrio sp. HP20-59 as a promising polyhydroxybutyrate producer.

Shivani Adhvaryu, Jana Kiskova, Maria Piknova, Veronika Farkasova, Iva Buchtikova, Xenie Kourilova, Martin Kizovsky, Marketa Benesova, Ota Samek, Stanislav Obruca and 1 more

Abstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Shivani AdhvaryuDepartment of Microbiology, Institute of Biology and Ecology, Faculty of Science, Pavol Jozef Safarik University of Kosice, Srobarova 1014/2, 04180, Kosice, Slovakia.
Jana KiskovaDepartment of Microbiology, Institute of Biology and Ecology, Faculty of Science, Pavol Jozef Safarik University of Kosice, Srobarova 1014/2, 04180, Kosice, Slovakia. jana.kiskova@upjs.sk.ORCID http://orcid.org/0000-0002-0753-9231
Maria PiknovaDepartment of Microbiology, Institute of Biology and Ecology, Faculty of Science, Pavol Jozef Safarik University of Kosice, Srobarova 1014/2, 04180, Kosice, Slovakia.
Veronika FarkasovaDepartment of Microbiology, Institute of Biology and Ecology, Faculty of Science, Pavol Jozef Safarik University of Kosice, Srobarova 1014/2, 04180, Kosice, Slovakia.
Iva BuchtikovaInstitute of Food Science and Biotechnology, Faculty of Chemistry, Brno University of Technology, Purkynova 464/118, 61200, Brno, Czech Republic.
Xenie KourilovaInstitute of Food Science and Biotechnology, Faculty of Chemistry, Brno University of Technology, Purkynova 464/118, 61200, Brno, Czech Republic.
Martin KizovskyInstitute of Scientific Instrumentsof the , Czech Academy of Sciences, Brno, 61264, Czech Republic.
Marketa BenesovaInstitute of Scientific Instrumentsof the , Czech Academy of Sciences, Brno, 61264, Czech Republic.
Ota SamekInstitute of Scientific Instrumentsof the , Czech Academy of Sciences, Brno, 61264, Czech Republic.
Stanislav ObrucaInstitute of Food Science and Biotechnology, Faculty of Chemistry, Brno University of Technology, Purkynova 464/118, 61200, Brno, Czech Republic.
Peter PristasDepartment of Microbiology, Institute of Biology and Ecology, Faculty of Science, Pavol Jozef Safarik University of Kosice, Srobarova 1014/2, 04180, Kosice, Slovakia.

Funding

MEYS CR LM2023050Ministry of education, research, development and youth of the Slovak republic VEGA-1/0779/21Pavol Jozef Safarik University in Kosice VVGS-PF-2023-2545
6 · The paper itself

Abstract

Since plastics pose the greatest threat to humanity, it is essential to find an economic and sustainable solution to combat environmental pollution. In this study, the ability of polyhydroxyalkanoates (PHA) production by the halophilic bacterium Halovirbrio sp. HP20-59 in the presence of different carbon sources was examined. The strain showed a selective substrate preference, with the highest PHA production (reaching up to 73% of cell dry weight) in the presence of galactose, while fructose, arabinose, glycerol and xylose resulted in lower accumulation. Phylogenetic analysis based on the 16S rRNA gene sequence and whole-genome sequencing confirmed the HP20-59 strain as a novel species within the Oceanospirillales order. Draft genome showed a size of 4,165,370 bp with a GC content of 55.1% and a complete set of pha genes. The comparative analysis of the phaC gene identified a 638 amino acid-long class I poly(R)-hydroxyalkanoic acid synthase, showing 91% similarity to Halovibrio variabilis and 89% similarity to species within the Vreelandella genus, suggesting a possible horizontal gene transfer of the pha gene cluster. These findings highlight the unique genetic and metabolic characteristics of Halovibrio sp. HP20-59, making it a promising candidate for industrial PHA production and a valuable resource for research on sustainable biopolymers. KEY POINTS: The first study of PHB production by the halophilic Halovibrio spp. The highest level of PHB production observed using glucose, galactose, and sucrose. phaCAB operon possibly acquired by horizontal gene transfer from Vreelandella sp.

Indexed as

Genome, BacterialHydroxybutyratesPolyhydroxyalkanoatesAcyltransferasesBase CompositionCarbonDNA, BacterialPhylogenyPolyhydroxybutyratesRNA, Ribosomal, 16SSequence Analysis, DNAWhole Genome SequencingAcyltransferasesCarbonDNA, BacterialHydroxybutyratespoly(3-hydroxyalkanoic acid) synthasePolyhydroxyalkanoatespolyhydroxybutyratePolyhydroxybutyratesRNA, Ribosomal, 16SHalophilesHalovibrioOceanospirillales orderPHA synthase (PhaC)PolyhydroxyalkanoatesRaman spectroscopy

Identifiers

PMID41520089
PMCPMC12791064

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.