Evidence map›Paper›PMID 41518539›Full record

ArticleMicrobial ecology2026

Rare Microbial Taxa Dominate the Microecological Landscape of Cadmium Exposure in Rice Rhizosphere.

Chenxi Kou, Dandan Li, Zengbing Liu, Wei Gao, Wenxue Zhang, Li Xiong, Longxin He, Mingcong Li, Aiping Shu, Jinbiao Ma and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Microbial ecology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Chenxi KouInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China.
Dandan LiInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China.
Zengbing LiuInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China.
Wei GaoState Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, 271000, Tai'an, China.
Wenxue ZhangInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China.
Li XiongInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China.
Longxin HeInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China.
Mingcong LiState Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, 271000, Tai'an, China.
Aiping ShuInstitute of Soil and Fertilizer&Resource and Environment of Jiangxi Academy of Agricultural Sciences, 330200, Nanchang, China. shuaiping2024@126.com.
Jinbiao MaState Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, 271000, Tai'an, China. Jinbiaoma@sdau.edu.cn.
Zheng GaoState Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, 271000, Tai'an, China.

Funding

The Funding for the 'First Class Discipline' Construction Project of Shandong Agricultural University SKL81103The Jiangxi Provincial Natural Science Foundation 20232BAB215012The National Natural Science Foundation of China 42377309, 42407427The Young Talent of Lifting engineering for Science and Technology in Shandong SDAST2024QTA012This study was supported by National Key R&D Program of China 2023YFD2301301, 2017YFD0301601
6 · The paper itself

Abstract

Cadmium (Cd) contamination in soil is a growing problem, posing a significant threat to soil microorganisms and plant growth. Understanding how Cd exposure disrupts the evolution of soil microbial communities and the mechanisms underlying community remodeling requires further investigation. In this study, the rice rhizosphere treated with 0 (CK), 2.5 (LC), 5 (MC), and 15 (HC) mg kg−1 Cd was used as a model and combined with 16S rRNA gene sequencing to systematically evaluate the response patterns of rice rhizosphere microbial communities under Cd gradient treatments. The study found that rice rhizosphere microbial communities responded to Cd exposure with a unimodal pattern of “low-promotion and high-suppression”. LC treatment significantly increased the alpha diversity of rare fungal taxa and significantly enriched rare genera such as Candidatus Solibacter and Penicillium. Network analysis further confirmed that LC treatment significantly enhanced symbiotic relationships within and across rare taxa. The assembly of abundant bacterial and fungal taxa was consistently dominated by stochastic diffusional constraints, while rare taxa were primarily driven by deterministic homogeneous selection. In summary, rice rhizosphere microbial communities showed specific response patterns under Cd gradient treatment. Rare fungal taxa, as core members, actively responded to Cd exposure, made prominent contributions to shaping the community composition, and played a crucial role in maintaining the complexity and stability of the microbial network.

Indexed as

BacteriaCadmiumFungiMicrobiotaOryzaRhizosphereSoil MicrobiologySoil PollutantsRNA, Ribosomal, 16SSoilCadmiumRNA, Ribosomal, 16SSoilSoil PollutantsCd gradient stressMicrobial community assemblyRare microbial taxaSoil microecology

Identifiers

PMID41518539
PMCPMC12860852

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.