Evidence map›Paper›PMID 41513091›Full record

ArticleThe Journal of biological chemistry2026

Enzymatic basis of branching and extension of O-Man glycans for keratan sulfate biosynthesis.

Tomoya Itoh, Hide-Nori Tanaka, Mohit Pareek, Masamichi Nagae, Hiroshi Manya, Akemi Ido, Sushil K Mishra, Yasuhiko Kizuka

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tomoya ItohGraduate School of Natural Science and Technology, Gifu University, Gifu, Japan.
Hide-Nori TanakaGraduate School of Natural Science and Technology, Gifu University, Gifu, Japan; Institute for Glyco-Core Research (iGCORE), Gifu University, Gifu, Japan.
Mohit PareekDepartment of Biomedical Engineering, University of Mississippi, Mississippi, USA.
Masamichi NagaeDepartment of Molecular Immunology, Research Institute for Microbial Diseases, The University of Osaka, Suita, Japan; Laboratory of Molecular Immunology, Immunology Frontier Research Center (IFReC), The University of Osaka, Suita, Japan.
Hiroshi ManyaMolecular Glycobiology, Research Team for Mechanism of Aging, Tokyo Metropolitan Institute for Geriatrics and Gerontology, Tokyo, Japan.
Akemi IdoInstitute for Glyco-Core Research (iGCORE), Gifu University, Gifu, Japan.
Sushil K MishraDepartment of Biomedical Engineering, University of Mississippi, Mississippi, USA. Electronic address: sushil@olemiss.edu.
Yasuhiko KizukaGraduate School of Natural Science and Technology, Gifu University, Gifu, Japan; Institute for Glyco-Core Research (iGCORE), Gifu University, Gifu, Japan. Electronic address: kizuka.yasuhiko.k8@f.gifu-u.ac.jp.

Funding

Tracking Glycosylation State with Fluorinated Glycosides ProbesP20GM130460 · NIGMS · UNIVERSITY OF MISSISSIPPI · PI Joshua S Sharp · 2020 to 2026
$17.9M
NIGMS NIH HHS P20 GM130460
6 · The paper itself

Abstract

O-Mannose (Man) glycans are branched specifically in the brain by a dedicated glycosyltransferase, N-acetylglucosaminyltransferase IX (GnT-IX, also known as MGAT5B). Such branching of O-Man glycans was reported to be involved in diseases, including demyelination and glioma, but the enzymatic mechanisms by which O-Man glycan is specifically recognized by GnT-IX and how branched O-Man glycans are subsequently elongated by other enzymes in the brain have remained unclear. To shed light on these issues, we here first compared the structural model of GnT-IX complexed with its O-Man substrate with the crystal structure of the homologous N-glycan branching enzyme GnT-V (also known as MGAT5). Several residues in GnT-IX were predicted to be critical to recognition of the O-Man substrate, and an enzyme assay revealed that R304 in GnT-IX is crucial for the specificity toward O-Man glycans. We further investigated the role of O-Man branching for subsequent elongation in the brain and found that the level of keratan sulfate (KS) in O-Man glycans was significantly reduced in GnT-IX-knockout (KO) mouse brain, suggesting that O-Man branching promotes KS biosynthesis. Mechanistically, our enzymatic assays of the KS biosynthetic enzymes demonstrated that B4GALT1, B4GALT4, and CHST1 exhibited significantly higher activity toward branched O-Man glycans than toward their linear counterparts. These results imply that branching of O-Man glycans by GnT-IX provides the scaffold for efficient subsequent glycan elongation. Our findings deepen our understanding of the complex biosynthetic pathway of O-Man glycans in the brain.

Indexed as

Keratan SulfateMannoseN-AcetylglucosaminyltransferasesPolysaccharidesAnimalsBrainHumansMiceModels, MolecularKeratan SulfateMannoseN-AcetylglucosaminyltransferasesPolysaccharidesglycobiologyglycoprotein biosynthesisglycosaminoglycanglycosylationglycosyltransferasekeratan sulfateMGAT5B (GnT-IX)O-mannose glycan

Identifiers

PMID41513091
PMCPMC12860957

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.