Evidence map›Paper›PMID 41510228›Full record

ArticleResearch square2025

Hydrophobic complementarity-determining region 3 (CDR3) sequences elucidate the cardiotoxic effects of immune checkpoint inhibitors.

Shoiab Bukhari, Rajat Mohindra, Matthieu Paiola, Carly Tymm, Robert Winchester, Aditi Guha, Laura Tang, Sanjay Bansal, Brian S Henick, G Scott Chandler and 1 more

Abstract readPreprint
In one paragraph

Article in Research square, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Shoiab BukhariColumbia University Medical Center.
Rajat MohindraF. Hoffmann-La Roche.
Matthieu PaiolaColumbia University Medical Center.
Carly TymmColumbia University Medical Center.
Robert WinchesterColumbia University Medical Center.
Aditi GuhaGenentech, Inc.
Laura TangGenentech, Inc.
Sanjay BansalGenentech, Inc.
Brian S HenickColumbia University Medical Center.
G Scott ChandlerF. Hoffmann-La Roche.
Adam MorColumbia University Medical Center.

Funding

Novel mechanisms regulating PD-1 signaling and functionR01AI125640 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Adam Mor · 2016 to 2026
$4.3M
A systematic approach to uncover the basic mechanisms of checkpoint inhibitor immune related adverse eventsR01AI175498 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Adam Mor, Robert J Winchester · 2023 to 2026
$2.9M
PAG is a novel target in immunotherapyR01AI150597 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MOR, ADAM · 2020 to 2024
$2.7M
BD Biosciences InfluxS10OD020056 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SNOECK, HANS-WILLEM E · 2015 to 2015
$600k
Becton Dickinson LSR II Analytical Flow CytometerS10RR027050 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CLYNES, RAPHAEL A. · 2011 to 2011
$413k
(PQ8) Predictive biomarkers for the onset of immune-related adverse events associated with PD-1 blockadeR21CA231277 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MOR, ADAM · 2019 to 2020
$361k
NCI NIH HHS R21 CA231277NCRR NIH HHS S10 RR027050NIAID NIH HHS R01 AI125640NIAID NIH HHS R01 AI150597NIAID NIH HHS R01 AI175498NIH HHS S10 OD020056
6 · The paper itself

Abstract

Immune checkpoint inhibitors (ICIs) have significantly changed cancer treatment, demonstrating strong efficacy across multiple cancers. However, their use also carries the risk of serious immune-related side effects (irAEs), especially cardiotoxicity. To understand how these adverse effects occur, we studied peripheral blood mononuclear cells and T cells taken from the heart tissue of cancer patients who experienced cardiotoxicity during ICI therapy. Using spectral flow cytometry, single-cell RNA sequencing, and T cell receptor (TCR) sequencing, we found key differences in the immune profiles of affected patients. Those with cardiotoxicity had a noticeable increase in circulating CD4 + FOXP3 + and CD8 + PRF1 + T cells at disease onset. Our results also show that effector CD8 T cells are present in the heart tissue and pericardial fluid of patients with myocarditis, highlighting their role in starting the disease. TCR sequencing revealed expansions of CD8 GZMK + GZMA + and CD8 PRF1 + GZMA + T cells in myocarditis patients, along with increased activation markers CD69 and KLRG1, supporting the idea that specific cytotoxic CD8 T cell groups promote inflammation. Notably, we also found that T cells from patients with irAE myocarditis have shorter TCR CDR3 sequences, with a higher proportion of hydrophobic residues. This discovery suggests a new mechanism for TCR involvement in irAE myocarditis, focusing on T cell activation through the TCR's functional promiscuity, which relies more on TCR-MHC interactions than on specific peptide features. Overall, this research provides a foundation for new strategies targeting TCR physical properties to reduce risks and develop more precise therapies for vulnerable patients.

Indexed as

CardiotoxicityCDR3effector T cellshydrophobic TCRimmune-related adverse eventsmyocarditisperforin 1T cell receptor

Identifiers

PMID41510228
PMCPMC12776525

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.