Evidence map›Paper›PMID 41509402›Full record

ArticlebioRxiv : the preprint server for biology2025

Taxonomic context and genomic architecture jointly shape expression divergence across animals.

Perry A LaBoone, Antara Anika Piya, Raquel Assis

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Perry A LaBooneDepartment of Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL 33431, USA.ORCID 0009-0007-1459-4443
Antara Anika PiyaDepartment of Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL 33431, USA.ORCID 0009-0005-2822-7148
Raquel AssisDepartment of Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL 33431, USA.ORCID 0000-0001-6389-1806

Funding

Learning about the evolution of structural variations from genomic and transcriptomic dataR35GM142438 · NIGMS · FLORIDA ATLANTIC UNIVERSITY · PI ASSIS, RAQUEL · 2021 to 2025
$1.9M
NIGMS NIH HHS R35 GM142438
6 · The paper itself

Abstract

Gene expression divergence is a major source of phenotypic variation, yet the factors that shift regulatory optima remain incompletely understood. In particular, it is unclear how broad taxonomic differences and local genomic architecture interact to shape the tempo and mode of expression evolution. Here, we analyze single-copy orthologs between species pairs in

Indexed as

evolutiongene expressiongenome architecturenested genesneural network

Identifiers

PMID41509402
PMCPMC12776118

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.