Evidence map›Paper›PMID 41509391›Full record

ArticlebioRxiv : the preprint server for biology2026

FlashDeconv reveals resolution horizons in atlas-scale spatial transcriptomics.

Chen Yang, Xianyang Zhang, Jun Chen

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chen YangDepartment of Statistics, Texas A&M University, College Station, Texas, 77843, USA.ORCID 0009-0009-9151-2901
Xianyang ZhangDepartment of Statistics, Texas A&M University, College Station, Texas, 77843, USA.
Jun ChenDivision of Computational Biology, Department of Quantitative Health Sciences, Mayo Clinic, Rochester, Minnesota, 55905, USA.

Funding

Methods for microbiome compositional dataR01GM144351 · NIGMS · MAYO CLINIC ROCHESTER · PI Jun Chen, Xianyang Zhang · 2022 to 2026
$1.6M
NIGMS NIH HHS R01 GM144351
6 · The paper itself

Abstract

Coarsening Visium HD resolution from 8 to 64

Indexed as

Atlas-scale analysisCell type deconvolutionRandomized sketchingSpatial transcriptomicsVisium HD

Identifiers

PMID41509391
PMCPMC12776147

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.