Evidence map›Paper›PMID 41508058›Full record

ArticleFluids and barriers of the CNS2026

Neurovascular and metabolic dysfunction with cell type-specific transcriptomic changes in presymptomatic 5XFAD mice.

Minmin Yao, Na Sun, Raleigh Linville, Zhiliang Wei, Aaron Kakazu, Yuxiao Ouyang, Ruoxuan Li, Lida Du, Haitong Wang, Yuan Zhou and 9 more

Abstract read
In one paragraph

Article in Fluids and barriers of the CNS, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Reply to Zoghbi and Innis: Clarifying the cellular basis of GPR84-PET signal in neuroinflammation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Minmin Yao *Division of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Na Sun *Computer Science and Artificial Intelligence Lab, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, MA, 02139, USA.
Raleigh Linville *Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, USA.
Zhiliang Wei *The Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Aaron KakazuDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Yuxiao OuyangDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Ruoxuan LiDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Lida DuDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Haitong WangDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Yuan ZhouDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Yanli JiangDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA.
Ziqin ZhangDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Anna LiF.M. Kirby Research Center, Kennedy Krieger Research Institute, Baltimore, MD, USA.
Francisco J GarciaDepartment of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, USA.
Hanzhang LuThe Russell H. Morgan Department of Radiology and Radiological Sciences, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Jiadi XuDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
Manolis KellisComputer Science and Artificial Intelligence Lab, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, MA, 02139, USA.
Myriam HeimanDepartment of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, USA. mheiman@mit.edu.
Wenzhen DuanDivision of Neurobiology, Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, CMSC 8-121, 600 North Wolfe Street, Baltimore, MD, 21287, USA. wduan2@jhmi.edu.

Funding

Single Cell Transcriptomic and Epigenomic Dissection of Opioid and Cocaine Responses in HIVU01DA053631 · NIDA · BROAD INSTITUTE, INC. · PI HEIMAN, MYRIAM, KELLIS, MANOLIS · 2021 to 2025
$12.6M
TRD 4: Platforms for multi-modal and multi-scale imaging dataP41EB031771 · NIBIB · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI Peter CM Van Zijl · 2021 to 2026
$9.9M
Cerebrospinal fluid exchange in Alzheimer's disease characterized by advanced MRI techniquesR01AG080104 · NIA · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI JIadi Xu · 2023 to 2026
$2.9M
Advanced MRI biomarkers in HD mouse models translatable to humans: nature history and response to therapeuticsR01NS124084 · NINDS · JOHNS HOPKINS UNIVERSITY · PI DUAN, WENZHEN · 2022 to 2025
$2.6M
Pathophysiological mechanisms of hypoperfusion in mouse models of Alzheimer?s disease and small vessel diseaseR01AG081932 · NIA · JOHNS HOPKINS UNIVERSITY · PI Zhiliang Wei · 2023 to 2026
$2.1M
Single-cell multi-region transcriptional and epigenomic dissection of VCID.R01NS129032 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Myriam Heiman, Manolis Kellis · 2025 to 2026
$2.1M
Upgrade of the 11.7T Research Scanner at the F.M. Kirby Research CenterS10OD032188 · OD · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI VAN ZIJL, PETER CM · 2024 to 2024
$1.7M
Blood-brain barrier dysfunction in Alzheimer's disease: from humans to animal modelsR01AG071515 · NIA · JOHNS HOPKINS UNIVERSITY · PI Hanzhang Lu · 2024 to 2026
$1.6M
Single Cell Dissection of Cerebrovascular Dysfunction in Parkinson's Disease and Amyotrophic Lateral SclerosisF32NS128067 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI LINVILLE, RALEIGH MILLER · 2022 to 2024
$213k
NIA NIH HHS R01 AG071515NIA NIH HHS R01AG071515NIA NIH HHS R01 AG080104NIA NIH HHS R01AG080104NIA NIH HHS R01 AG081932NIA NIH HHS R01AG081932NIBIB NIH HHS P41 EB031771NIDA NIH HHS U01 DA053631NIDA NIH HHS U01DA053631NIH HHS P41EB031771NIH HHS S10 OD032188NINDS NIH HHS F32 NS128067NINDS NIH HHS F32NS128067NINDS NIH HHS R01 NS124084NINDS NIH HHS R01NS124084NINDS NIH HHS R01 NS129032NINDS NIH HHS R01NS129032
6 · The paper itself

Abstract

backgroundAltered cerebral metabolism and blood-brain barrier (BBB) dysfunction are increasingly recognized as key contributors to the preclinical phase of Alzheimer’s disease (AD), highlighting their importance in early pathogenesis. Sensitive biomarkers that precede irreversible neuronal loss and cognitive decline are urgently needed to enable early diagnosis and intervention. This study aimed to characterize early neurovascular and metabolic alterations, along with their associated cell-type-specific transcriptional signatures, in three-month-old presymptomatic 5XFAD mice.

methodsWater extraction with phase contrast arterial spin tagging (WEPCAST) MRI, a non-invasive, contrast-free, and clinically applicable technique, was used to assess BBB integrity in 5XFAD mice. BBB permeability to water molecules, water extraction fraction, and cerebral blood flow (CBF) were measured and used to calculate the permeability surface area product (PS). Cerebral metabolic rate of oxygen (CMRO₂) was evaluated by T2-relaxation under spin tagging (TRUST), while creatine chemical exchange saturation transfer (crCEST) MRI, a pH-sensitive measure, was employed to evaluate tissue acidification, respectively. To invesigate underlying molecular mechanisms, single-nucleus RNA sequencing (snRNA-Seq) with optimized blood vessel enrichment was performed on hippocampal tissue.

resultsThree-month-old 5XFAD mice exhibit increased BBB permeability to water molecules as detected by WEPCAST MRI, despite preserved macromolecular barrier integrity assessed by Sulfo-NHS-Biotin tracer, indicating subtle BBB functional alterations and highlighting the sensitivity of WEPCAST for detecting early BBB dysfunction. At this stage, 5XFAD mice showed significantly reduced CMRO₂, reflecting impaired oxygen metabolism. In addition, a hippocampal-specific reduction in the pH-dependent exchange rate of creatine guanidinium protons was observed in AD mice, accompanied by elevated neuronal H4K12 lactylation, consistent with tissue acidification. snRNA-seq analysis revealed cell type-specific transcriptional changes, including downregulation of genes related to brain barrier function and angiogenesis in cerebral endothelia cells, dysregulation of innate immune response genes in astrocytes, and upregulation of cholesterol biosynthesis and metabolism pathway genes in CA1 excitatory neurons.

conclusionsOur study demonstrates that BBB dysfunction and cerebral metabolic abnormalities emerge prior to brain hypoperfusion and cognitive decline in AD, underscoring their involvement in early disease mechanisms. These results identify molecular pathways and MRI-detectable biomarkers with potential utility for early diagnosis and therapeutic targeting in preclinical AD.

Indexed as

Alzheimer DiseaseBlood-Brain BarrierBrainCerebrovascular CirculationHippocampusTranscriptomeAnimalsDisease Models, AnimalMagnetic Resonance ImagingMaleMiceMice, TransgenicAlzheimer’s diseaseBlood brain barrierCerebral metabolismNeuroimaging biomarkersSingle cell transcriptomics

Identifiers

PMID41508058
PMCPMC12784622

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