Evidence map›Paper›PMID 41507424›Full record

ArticleCommunications biology2026

Genome anchoring, retention, and release by neck proteins of Staphylococcus phage 812.

Zuzana Cieniková, Jiří Nováček, Marta Šiborová, Barbora Popelářová, Tibor Füzik, Tibor Botka, Martin Benešík, Pavol Bárdy, Roman Pantůček, Pavel Plevka

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zuzana CienikováCEITEC Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0009-0000-8696-2566
Jiří NováčekCEITEC Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-4013-3898
Marta ŠiborováCEITEC Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-6879-5247
Barbora PopelářováCEITEC Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-3760-0539
Tibor FüzikCEITEC Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-1190-0210
Tibor BotkaDepartment of Experimental Biology, Faculty of Science, Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-2708-3718
Martin BenešíkDepartment of Experimental Biology, Faculty of Science, Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.
Pavol BárdyDepartment of Experimental Biology, Faculty of Science, Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-1223-2584
Roman PantůčekDepartment of Experimental Biology, Faculty of Science, Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic.ORCID http://orcid.org/0000-0002-3950-675X
Pavel PlevkaCEITEC Masaryk University, Kamenice 753/5, 625 00, Brno, Czech Republic. pavel.plevka@ceitec.muni.cz.ORCID http://orcid.org/0000-0003-4215-3315

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101043452
6 · The paper itself

Abstract

The virion of Staphylococcus phage 812 is formed by a capsid and a contractile tail joined together by neck proteins. The neck proteins are crucial for virion assembly, DNA packaging, and the regulation of genome release, but their functions are not completely understood. Here, we show that the neck of phage 812 consists of portal, adaptor, stopper, tail terminator, and two types of decoration proteins. A dodecameric DNA-binding site at the surface of the portal complex anchors the phage genome inside the capsid. The adaptor complex induces a local B-to-A form transition of the DNA in the neck channel that could slow or pause genome translocation during ejection. The central channel of a stopper complex that is not attached to the tail terminator complex is closed by gating loops. In contrast, in the phage 812 virion, the gating loops are in an open conformation, and the DNA extends into the tail. The structure of neck proteins is not affected by tail sheath contraction. Therefore, the expulsion of tail tape measure proteins triggers the genome release.

Indexed as

Genome, ViralStaphylococcus PhagesViral ProteinsCapsidDNA, ViralVirionVirus AssemblyDNA, ViralViral Proteins

Identifiers

PMID41507424
PMCPMC12886913

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.