Evidence map›Paper›PMID 41507163›Full record

ArticleNature communications2026

Time-resolved multiomics profiling reveals chromatin O-GlcNAc modification promotes senescence-associated transcriptional program.

Nana Zhang, Ran Zhao, Xiaomin Zhong, Qian Dong, Yajie Liu, Kairan Yu, Lirui Han, Fanxu Meng, Jiaxuan Wu, Qiushi Chen and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Nana Zhang *Cancer Hospital of Dalian University of Technology, Liaoning Cancer Hospital & Institute, Shenyang, China.
Ran Zhao *College of Life and Health Sciences, Northeastern University, Shenyang, China.
Xiaomin Zhong *Department of Oncology, The Affiliated Huaian No.1 People's Hospital of Nanjing Medical University, Huai'an, China.
Qian DongCollege of Life and Health Sciences, Northeastern University, Shenyang, China.
Yajie LiuInstrumental Analysis Center, Dalian University of Technology, Dalian, China.
Kairan YuDepartment of Life and Pharmaceutical Sciences, Dalian University of Technology, Panjin, China.
Lirui HanDepartment of Life and Pharmaceutical Sciences, Dalian University of Technology, Panjin, China.
Fanxu MengDepartment of Life and Pharmaceutical Sciences, Dalian University of Technology, Panjin, China.
Jiaxuan WuJiangsu Province Higher Education Key Laboratory of Cell Therapy Nanoformulation (Construction), Wisdom Lake Academy of Pharmacy, Xi'an Jiaotong-Liverpool University, Suzhou, China.
Qiushi ChenDepartment of Chemistry, State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Hong Kong, China.ORCID http://orcid.org/0000-0001-8355-2801
Xuechen LiDepartment of Chemistry, State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Hong Kong, China.ORCID http://orcid.org/0000-0001-5465-7727
Qingbin ChenShenzhen Salus BioMed Co., Ltd., Shenzhen, China.
Keren ZhangDepartment of Chemistry, College of Science, Southern University of Science and Technology, Shenzhen, China.
Huang HuangDepartment of Life and Pharmaceutical Sciences, Dalian University of Technology, Panjin, China.
Jianing ZhangCancer Hospital of Dalian University of Technology, Liaoning Cancer Hospital & Institute, Shenyang, China.ORCID http://orcid.org/0000-0002-4514-9197
Sijin WuJiangsu Province Higher Education Key Laboratory of Cell Therapy Nanoformulation (Construction), Wisdom Lake Academy of Pharmacy, Xi'an Jiaotong-Liverpool University, Suzhou, China. sijin.wu@xjtlu.edu.cn.ORCID http://orcid.org/0000-0003-4554-4610
Yan RenExperiment Center for Science and Technology, Shanghai University of Traditional Chinese Medicine, Shanghai, China. reny@bgi.com.ORCID http://orcid.org/0000-0002-4007-8625
Wei WangCancer Hospital of Dalian University of Technology, Liaoning Cancer Hospital & Institute, Shenyang, China. wangwei_9111@hotmail.com.
Yubo LiuCancer Hospital of Dalian University of Technology, Liaoning Cancer Hospital & Institute, Shenyang, China. liuyubo@dlut.edu.cn.ORCID http://orcid.org/0000-0003-0645-0822

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32171282National Natural Science Foundation of China (National Science Foundation of China) 32471331
6 · The paper itself

Abstract

O-GlcNAc modification is a key cellular signal, but its role in regulating senescence-associated transcription remains poorly understood. Here, we apply a time-resolved chemical genomics strategy to map dynamic O-GlcNAc chromatin-associated proteins (OCPs) during oncogene-induced senescence (OIS) in primary human fibroblasts. Chromatin O-GlcNAc modification continues to accumulate, while 1,987 senescence-associated OCPs undergo dynamic shifts in genomic occupancy across diverse epigenetic chromatin states and display bimodal regulatory activities within the 3,466-gene senescence transcriptome. O-GlcNAc facilitates the formation of dual-function complexes: TF-SWI/SNF activates senescence-associated secretory phenotype (SASP) genes at promoters, whereas NuRD enforces the repression of cell-cycle regulators at enhancers. Furthermore, we identify O-GlcNAc modified JUN and GATAD2A as key regulators of OIS phenotypes in both in vitro and in vivo models of senescence-driven tumorigenesis. These findings reveal dynamic regulation and chromatin organization principles of O-GlcNAc-related epigenetic factors, providing insights into cellular senescence and potential therapeutic strategies.

Indexed as

AcetylglucosamineCellular SenescenceChromatinTranscription, GeneticAnimalsEpigenesis, GeneticFibroblastsHumansMiceMultiomicsPromoter Regions, GeneticSenescence-Associated Secretory PhenotypeAcetylglucosamineChromatin

Identifiers

PMID41507163
PMCPMC12881531

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.