Evidence map›Paper›PMID 41501044›Full record

ArticleNature communications2026

Uncertainty-aware machine learning to predict non-cancer human toxicity for the global chemicals market.

Kerstin von Borries, Katie V Beckwith, Jonathan M Goodman, Weihsueh A Chiu, Olivier Jolliet, Peter Fantke

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Planetary Boundary for Novel Entities: Time for a Reboot.Environmental science & technology · 2026
    Review
  4. Article
  5. Article
  6. Framework for Function-Based Pesticide Substitution.Environmental science & technology · 2026
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kerstin von BorriesQuantitative Sustainability Assessment, Department of Environmental and Resource Engineering, Technical University of Denmark, Bygningstorvet 115, 2800, Kgs. Lyngby, Denmark. kejbo@dtu.dk.ORCID http://orcid.org/0000-0001-9438-6562
Katie V BeckwithCentre for Molecular Informatics, Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0003-0612-4453
Jonathan M GoodmanCentre for Molecular Informatics, Yusuf Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0002-8693-9136
Weihsueh A ChiuDepartment of Veterinary Physiology and Pharmacology, Texas A&M University, 4466 TAMU, College Station, TX, USA.ORCID http://orcid.org/0000-0002-7575-2368
Olivier JollietQuantitative Sustainability Assessment, Department of Environmental and Resource Engineering, Technical University of Denmark, Bygningstorvet 115, 2800, Kgs. Lyngby, Denmark.ORCID http://orcid.org/0000-0001-6955-4210
Peter FantkeQuantitative Sustainability Assessment, Department of Environmental and Resource Engineering, Technical University of Denmark, Bygningstorvet 115, 2800, Kgs. Lyngby, Denmark. peter@substitute.dk.ORCID http://orcid.org/0000-0001-7148-6982

Funding

Single cell, multi-parametric high throughput platform to classify endocrine disruptor potential of mixturesP42ES027704 · NIEHS · TEXAS A&M UNIVERSITY · PI Efstratios Pistikopoulos · 2017 to 2026
$21.2M
Texas A&M Center for Environmental Health Research (TiCER)P30ES029067 · NIEHS · TEXAS A&M UNIVERSITY · PI Sakhila Banu · 2019 to 2026
$13.0M
NIEHS NIH HHS P30 ES029067NIEHS NIH HHS P42 ES027704RCUK | Engineering and Physical Sciences Research Council (EPSRC) EP/S024220/1Stiftelsen för Miljöstrategisk Forskning (Swedish Foundation for Strategic Environmental Research) DIA 2018/11
6 · The paper itself

Abstract

Humans are exposed to thousands of chemicals, yet limited toxicity data hinder effective management of their impacts on human health. High-performing machine learning models hold potential for addressing this gap, but their uncharacterized prediction performance across the wider range of chemicals undermines confidence in their results. We develop uncertainty-aware models to predict reproductive/developmental and general non-cancer human toxicity effect doses. Our well-calibrated models provide uncertainty estimates aligned with observed prediction errors and chemical familiarity. We predict toxicity with 95% confidence intervals for >100,000 globally marketed chemicals and identify toxicity and uncertainty hotspots. These results can be applied to inform decisions aimed at reducing potential human health impacts and guide targeted data generation and modeling efforts to reduce prediction uncertainty. Here, we show that enhancing transparency in prediction uncertainty provides key insights for building confidence in toxicity predictions, supporting the sound integration of machine learning-based predictions in chemical assessments.

Indexed as

Machine LearningHumansPrediction AlgorithmsPredictive Learning ModelsUncertainty

Identifiers

PMID41501044
PMCPMC12816579

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.