Evidence map›Paper›PMID 41495854›Full record

ArticleBMC pharmacology & toxicology2026

Integrated in silico and in vitro evaluation of Genistein and Apigenin as dual inhibitors of PARP1 and ESR1 in breast cancer.

Monica Arora, Yahya S Yaseen, Ammar A Razzak Mahmood, Sibghatullah Muhammad Ali Sangi, Sreeharsha Nagaraja, Santosh Prasad Chaudhary Kurmi, Shankar Thapa

Abstract read
In one paragraph

Article in BMC pharmacology & toxicology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Monica AroraFaculty of Health Sciences, Villa College, QI Campus, Rahdhebai Hingun, Male', 20373, Republic of Maldives.ORCID http://orcid.org/0009-0003-0633-6621
Yahya S YaseenDepartment of Pharmaceutical Chemistry, College of Pharmacy, University of Tikrit, Tikrit, Iraq.ORCID http://orcid.org/0009-0002-2026-7522
Ammar A Razzak MahmoodDepartment of Pharmaceutical Chemistry, College of Pharmacy, University of Baghdad, Baghdad, Iraq.ORCID http://orcid.org/0000-0002-4915-417X
Sibghatullah Muhammad Ali SangiBasic Medical Sciences Department, Dar Al Uloom University, College of Medicine, Riyadh, 13314, Saudi Arabia.
Sreeharsha NagarajaDepartment of Pharmaceutical Sciences, College of Clinical Pharmacy, King Faisal University, Al-Ahsa, 31982, Saudi Arabia. sharsha@kfu.edu.sa.ORCID http://orcid.org/0000-0002-2058-255X
Santosh Prasad Chaudhary KurmiDepartment of Pharmacy, Universal College of Medical Sciences, Bhairahawa, 32900, Nepal.ORCID http://orcid.org/0009-0007-0454-2471
Shankar ThapaDepartment of Pharmacy, Universal College of Medical Sciences, Bhairahawa, 32900, Nepal. tshankar551@gmail.com.ORCID http://orcid.org/0000-0003-1801-5668

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBreast cancer remains a leading cause of cancer-related mortality among women worldwide, highlighting the need for safer multitarget therapies. Genistein (GNT) and Apigenin are plant-derived flavonoids with reported anticancer properties, but their dual mechanisms against key breast cancer targets have not been comprehensively explored.

methodsAn integrative in silico approach was employed, including network pharmacology, onco-omics profiling, protein–protein interaction analysis, molecular docking, and 100 ns molecular dynamics (MD) simulations, to identify and validate key targets of GNT and Apigenin. Gene expression, immune infiltration, and survival analyses were performed using GEPIA2 and TIMER2.0. ADMET and toxicity predictions assessed drug-likeness and safety. Cytotoxic activity was evaluated in HCC1937 cells, a triple-negative breast cancer cell line selected to assess estrogen receptor–independent anticancer effects, using the MTT assay.

resultsNetwork analysis prioritized PARP1 and ESR1 as central targets. Docking showed strong affinities of Apigenin for PARP1 (–9.6 kcal/mol) and GNT for ESR1 (–8.3 kcal/mol). MD simulations and MM-GBSA confirmed stable binding with favorable free energy (ΔG_bind = − 74.9 kcal/mol). KEGG enrichment highlighted pathways including estrogen signaling, endocrine resistance, and PI3K–Akt signaling. Both compounds exhibited favorable ADMET profiles and low predicted toxicity. In vitro, GNT and Apigenin produced dose-dependent cytotoxicity against HCC1937 cells with IC50 values of 67.01 ± 1.67 µM and 70.24 ± 1.45 µM, respectively.

conclusionThese findings demonstrate that GNT and Apigenin modulate key oncogenic pathways through PARP1 and ESR1 interaction and exert cytotoxic effects in TNBC cells. This suggests their potential as low-toxicity adjuvant agents in breast cancer therapy, particularly where endocrine resistance or BRCA1-associated tumor progression is involved.

Indexed as

Antineoplastic AgentsApigeninBreast NeoplasmsEstrogen Receptor alphaGenisteinPoly (ADP-Ribose) Polymerase-1Cell Line, TumorComputer SimulationFemaleHumansMolecular Docking SimulationMolecular Dynamics SimulationAntineoplastic AgentsApigeninESR1 protein, humanEstrogen Receptor alphaGenisteinPARP1 protein, humanPoly (ADP-Ribose) Polymerase-1ApigeninBreast cancerESR1GNTNetwork pharmacology

Identifiers

PMID41495854
PMCPMC12784584

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.