Evidence map›Paper›PMID 41495127›Full record

ArticleScientific reports2026

Genomic and epidemiological insights into the emergence and dominance of MRSA clones in Riyadh's healthcare facilities.

Dalal M Alkuraythi, Manal M Alkhulaifi, Dina A Altwiley, Mohammed Alarwi, Mohammed I Mujallad, Mohammad K Alshomrani, Takashi Gojobori, Sulaiman M Alajel

Abstract read
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dalal M AlkuraythiDepartment of Biological Sciences, College of Science, University of Jeddah, Jeddah, 23445, Saudi Arabia. Dalkrithi@uj.edu.sa.
Manal M AlkhulaifiDepartment of Botany and Microbiology, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia.
Dina A AltwileyDepartment of Biological Sciences, College of Science, University of Jeddah, Jeddah, 23445, Saudi Arabia.
Mohammed AlarwiComputational Bioscience Research Center, Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, 23955, Saudi Arabia.
Mohammed I MujalladFood and Drug Authority, Jeddah, 22235, Saudi Arabia.
Mohammad K AlshomraniMicrobiology Department, Riyadh Regional Laboratory, Ministry of Health, Riyadh, 12746, Saudi Arabia.
Takashi GojoboriComputational Bioscience Research Center, Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal, 23955, Saudi Arabia.
Sulaiman M AlajelNational Livestock and Fisheries Development Program, Head of Biotechnology Sector, Riyadh, Saudi Arabia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence and expansion of methicillin-resistant Staphylococcus aureus (MRSA) clones in healthcare facilities pose a significant public health concern due to their adaptability and resistance to commonly used antibiotics. In this study, the genomic and epidemiological characteristics of 81 MRSA isolates collected between February and June 2022 were analyzed. ST5 (25.9%) and ST6 (19.7%) emerged as the dominant sequence types, collectively accounting for 45.6% of infections. Whole-genome sequencing and phenotypic analyses revealed that ST5 clone exhibited a broader multidrug-resistant profile compared to ST6 clone, with higher prevalence of β-lactam, tetracycline, and trimethoprim resistance. ST6 clone showed more variable resistance, including aminoglycoside and macrolide genes, suggesting a possible community origin before adaptation to hospital settings. Phylogenetic analysis demonstrated ongoing microevolution within Clonal Complex 5 (CC5), including the identification of novel single-locus variants such as ST8111. Correlation analyses highlighted significant associations between key resistance genes and their phenotypic profiles, reflecting complex co-resistance mechanisms. Additionally, virulence profiling revealed that ST5 uniquely carried tsst-1, whereas PVL genes were absent in both ST5 and ST6 and appeared only in a small subset of other MRSA clones. The emergence of highly resistant clones like ST672 underscores the potential concern for sustained genomic surveillance. The observed clonal shift from ST239 to ST5 and ST6 signals a dynamic MRSA landscape in Saudi Arabia, emphasizing the need for integrated molecular epidemiology and targeted infection control strategies.

Indexed as

Methicillin-Resistant Staphylococcus aureusStaphylococcal InfectionsAnti-Bacterial AgentsBacterial ToxinsDrug Resistance, Multiple, BacterialGenome, BacterialGenomicsHumansMicrobial Sensitivity TestsPhylogenySaudi ArabiaWhole Genome SequencingAnti-Bacterial AgentsBacterial ToxinsAntimicrobial resistanceGenomic epidemiologyMRSASaudi arabiaST5ST6

Identifiers

PMID41495127
PMCPMC12852192

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.