Evidence map›Paper›PMID 41495087›Full record

ArticleScientific data2026

The University of California San Diego Post-Treatment Glioblastoma (UCSD-PTGBM) annotated multimodal MRI Dataset.

Louis Gagnon, Diviya Gupta, Uyen Nguyen, Maria Correia de Verdier, Rachit Saluja, George Mastorakos, Nathan White, Vanessa Goodwill, Carrie R McDonald, Thomas Beaumont and 10 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Louis GagnonDepartment of Radiology, University of California San Diego, San Diego, USA. louis.gagnon.9@ulaval.ca.
Diviya GuptaDepartment of Radiology, University of California San Diego, San Diego, USA.
Uyen NguyenDepartment of Radiology, University of California San Diego, San Diego, USA.ORCID http://orcid.org/0000-0003-4021-2748
Maria Correia de VerdierDepartment of Radiology, University of California San Diego, San Diego, USA.ORCID http://orcid.org/0000-0002-1164-1749
Rachit SalujaDepartment of Electrical and Computer Engineering, Cornell University and Cornell Tech, New York, NY, USA.
George MastorakosCortechs.ai, San Diego, USA.
Nathan WhiteCortechs.ai, San Diego, USA.
Vanessa GoodwillDepartment of Pathology, University of California San Diego, San Diego, USA.
Carrie R McDonaldDepartment of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, USA.
Thomas BeaumontDepartment of Neurosurgical Surgery, University of California San Diego, San Diego, USA.
Christopher ConlinDepartment of Radiology, University of California San Diego, San Diego, USA.
Tyler M SeibertDepartment of Radiology, University of California San Diego, San Diego, USA.
Jona Hattangadi-GluthDepartment of Radiation Medicine and Applied Sciences, University of California San Diego, San Diego, USA.
Santosh KesariDepartment of Translational Neurosciences, Pacific Neuroscience Institute and Saint John's Cancer Institute at Providence Saint Johns' Health Center, Santa Monica, CA, USA.ORCID http://orcid.org/0000-0003-3772-6000
Jessica D SchulteDepartment of Neuroscience, University of California San Diego, San Diego, USA.
David PiccioniDepartment of Neuroscience, University of California San Diego, San Diego, USA.
Kathleen M SchmaindaDepartment of Biophysics, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Nikdokht FaridDepartment of Radiology, University of California San Diego, San Diego, USA.
Anders M DaleDepartment of Radiology, University of California San Diego, San Diego, USA.ORCID http://orcid.org/0000-0002-6126-2966
Jeffrey D RudieDepartment of Radiology, University of California San Diego, San Diego, USA.

Funding

Towards a Virtual Biopsy: An improved multimodal imaging biomarker to guide treatment decisions in neuro-oncology by combining advanced tissue microstructure imaging with deep learningR44NS120796 · NINDS · CORTECHS LABS, INC. · PI WHITE, NATHAN SCOTT · 2021 to 2021
$255k
Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada (NSERC Canadian Network for Research and Innovation in Machining Technology) DiscoveryDOE | Advanced Research Projects Agency - Energy - U.S. Department of Energy | Small Business Innovative Research and Small Business Technology Transfer (SBIR/STTR) SBIR 1R44NS120796-01A1DOE | Small Business Innovative Research and Small Business Technology Transfer (Small Business Innovation Research (SBIR) and Small Business Technology Transfer (STTR)) SBIR 1R44NS120796-01A1Fonds de Recherche du Québec - Santé (Fonds de la recherche en sante du Quebec) Junior 1NINDS NIH HHS R44 NS120796RSNA Research and Education Foundation (RSNA Research & Education Foundation) Research Seed Grant
6 · The paper itself

Abstract

We present the University of California San Diego post-treatment glioblastoma (UCSD-PTGBM) annotated multimodal MRI dataset. The UCSD-PTGBM dataset includes 243 timepoints on 178 subjects with histopathologically-proven glioblastoma who were imaged with an advanced brain tumor protocol on 3 Tesla MRI scanners. Sequences include standard 3D imaging, as well as multishell diffusion (Restricted Spectrum Imaging, RSI) and perfusion imaging techniques (Arterial Spin Labelling, ASL and Dynamic Susceptibility Contrast, DSC), and neuroradiologist approved voxelwise tumor segmentations for both traditional segmentation masks and cellular tumor segmentations. The dataset also includes isocitrate dehydrogenase (IDH) mutation status and O6-methylguianine-DNA methyl-transferase (MGMT) promotor methylation status, as well as overall survival and progression free survival information for a subset of cases. We hope that researchers around the world will use these data to continue to improve analysis of post-operative MRI on glioblastoma patients, translate their findings into clinical practice and improve the management and outcome for these patients.

Indexed as

Brain NeoplasmsGlioblastomaMagnetic Resonance ImagingCaliforniaHumansIsocitrate DehydrogenaseMutationIsocitrate Dehydrogenase

Identifiers

PMID41495087
PMCPMC12886825

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.