Evidence map›Paper›PMID 41494508›Full record

ReviewCurrent opinion in microbiology2026

Exploring the computing power of microbes that shapes the environment.

Crislaine Ks Rocha, Ángeles Hueso-Gil, Lorea Alejaldre, Juan Rico, Paula Múgica-Galán, Ángel Goñi-Moreno

Abstract readReview
In one paragraph

Review in Current opinion in microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Crislaine Ks RochaSystems Biology Department, Centro Nacional de Biotecnologia, CSIC, Darwin 3, Madrid 28049, Spain.
Ángeles Hueso-GilSystems Biology Department, Centro Nacional de Biotecnologia, CSIC, Darwin 3, Madrid 28049, Spain.
Lorea AlejaldreSystems Biology Department, Centro Nacional de Biotecnologia, CSIC, Darwin 3, Madrid 28049, Spain.
Juan RicoSystems Biology Department, Centro Nacional de Biotecnologia, CSIC, Darwin 3, Madrid 28049, Spain.
Paula Múgica-GalánSystems Biology Department, Centro Nacional de Biotecnologia, CSIC, Darwin 3, Madrid 28049, Spain.
Ángel Goñi-MorenoSystems Biology Department, Centro Nacional de Biotecnologia, CSIC, Darwin 3, Madrid 28049, Spain. Electronic address: angel.goni@cnb.csic.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbes process input information into output responses through diverse genetic and metabolic mechanisms, effectively making them physical systems that compute. These computations profoundly shape the environment, from driving key chemical cycles in the soil to influencing the planet's atmosphere. Yet the complexity of natural microbial computations remains poorly understood, including the symbolic representation of information and the underlying algorithmic principles. Synthetic biology provides tools to implement simple but effective genetic circuits in living cells, enabling human-defined computations. These are typically Boolean gates and circuits for combinatorial input processing, but they also include sequential logic, memory-based systems, analog circuits, and distributed computations in cellular consortia. Twenty-five years after the first synthetic genetic circuits were built, the field is now exploring new approaches to move closer to the computing power of natural microbes. With a focus on bacteria, this review examines both natural and synthetic functions with the aim of bridging the complexity gap between them and argues that understanding and formalizing the ways in which microbes compute may be essential for improving synthetic genetic circuitry.

Indexed as

BacteriaBacterial Physiological PhenomenaGene Regulatory NetworksSynthetic Biology

Identifiers

PMID41494508
PMCPMC7618869

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.