Evidence map›Paper›PMID 41491493›Full record

ReviewGenome biology2026

Haplotype applications in genomic selection.

Tessa R MacNish, Thomas Bergmann, David Edwards

Abstract readReview
In one paragraph

Review in Genome biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tessa R MacNishSchool of Biological Sciences, The University of Western Australia, Perth, 6009, Australia.
Thomas BergmannSchool of Biological Sciences, The University of Western Australia, Perth, 6009, Australia.
David EdwardsSchool of Biological Sciences, The University of Western Australia, Perth, 6009, Australia. dave.edwards@uwa.edu.au.

Funding

Australian Research Council DP200100762
6 · The paper itself

Abstract

There is an urgent need to increase sustainable crop production. The application of molecular marker technologies such as genomic selection and machine learning based approaches are aiding accelerated crop improvement. Conventional molecular marker technologies use single nucleotide polymorphisms to predict traits, however these do not capture local epistasis and can be challenging for machine learning applications. With the growth of genome sequence data, it is possible to define haplotypes that can account for local epistatic effects and are more suitable for machine learning models. This review discusses the different methods for defining haplotype blocks and their application in plant breeding.

Indexed as

Genome, PlantGenomicsHaplotypesPlant BreedingSelection, GeneticCrops, AgriculturalEpistasis, GeneticMachine LearningPolymorphism, Single Nucleotide

Identifiers

PMID41491493
PMCPMC12870298

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.