Evidence map›Paper›PMID 41491239›Full record

ArticleNature neuroscience2026

CRISPR knockout screens reveal genes and pathways essential for neuronal differentiation and implicate PEDS1 in neurodevelopment.

Alana Amelan, Stephan C Collins, Nadirah S Damseh, Nanako Hamada, Ahd Salim, Elad Dvir, Galya Monderer-Rothkoff, Tamar Harel, Koh-Ichi Nagata, Binnaz Yalcin and 1 more

Abstract read
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In one paragraph

Article in Nature neuroscience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Origin of eukaryotic plasmalogen biosynthesis by horizontal gene transfer from myxobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Alana Amelan *Department of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel.
Stephan C Collins *INSERM Unit 1231, Université de Bourgogne-Europe, Dijon, France.
Nadirah S Damseh *Department of Pediatrics & Genetics, Makassed Hospital & Al-Quds Medical School, East Jerusalem, Palestine.ORCID http://orcid.org/0000-0002-2673-7612
Nanako HamadaDepartment of Molecular Neurobiology, Institute for Developmental Research, Aichi Developmental Disability Center, Kasugai, Japan.
Ahd SalimDepartment of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel.
Elad DvirDepartment of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel.
Galya Monderer-RothkoffDepartment of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel.
Tamar HarelDepartment of Genetics, Hadassah Medical Center, Jerusalem, Israel.
Koh-Ichi NagataDepartment of Molecular Neurobiology, Institute for Developmental Research, Aichi Developmental Disability Center, Kasugai, Japan.ORCID http://orcid.org/0000-0002-6827-8434
Binnaz YalcinINSERM Unit 1231, Université de Bourgogne-Europe, Dijon, France. binnaz.yalcin@inserm.fr.ORCID http://orcid.org/0000-0002-1924-6807
Sagiv ShifmanDepartment of Genetics, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel. sagiv.shifman@mail.huji.ac.il.ORCID http://orcid.org/0000-0003-4071-5361

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-18-CE12-0009Israel Science Foundation (ISF) 1863/24Israel Science Foundation (ISF) 466/21
6 · The paper itself

Abstract

Neurodevelopmental disorders (NDDs) arise from disruptions in brain development, yet the underlying pathways remain incompletely understood. Here we demonstrate that genome-wide CRISPR knockout screens in mouse embryonic stem cells differentiating into neural lineages identify hundreds of essential genes, only a minority of which are currently implicated in NDDs. Dominant NDD genes were enriched for transcriptional regulators, whereas recessive NDD genes were predominantly involved in metabolic processes. Mouse models for eight genes (Eml1, Dusp26, Dynlrb2, Mta3, Peds1, Sgms1, Slitrk4 and Vamp3) revealed marked neuroanatomical abnormalities, including microcephaly in half of the cases. Focusing on PEDS1, a key enzyme in plasmalogen biosynthesis, we identified a bi-allelic variant in individuals with microcephaly, global developmental delay and congenital cataracts. In mice, Peds1 deficiency led to accelerated cell-cycle exit and impaired neuronal differentiation and migration. These pathways required for neural differentiation provide a genetic framework for discovering additional NDD genes.

Indexed as

Cell DifferentiationClustered Regularly Interspaced Short Palindromic RepeatsNeurodevelopmental DisordersNeurogenesisNeuronsAnimalsCRISPR-Cas SystemsGene Knockout TechniquesHumansMaleMiceMice, Knockout

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.