Evidence map›Paper›PMID 41491179›Full record

ArticleRespiratory research2026

Single-cell RNA sequencing elucidates potential mechanisms of endothelial cells in lung region-specific repair and remodeling in combined pulmonary fibrosis and emphysema.

Huiyuan Hu, Zhuangjie Guo, Jin Zhang, Yidan Gao, Xuehan Jiang, Haoshuai Yang, Yufei Hu, Hong Zhang, Wanlu Song, Chaoyang Liang and 2 more

Abstract read
In one paragraph

Article in Respiratory research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Huiyuan Hu *First Clinical College, Xi'an Jiaotong University, Yanta West Road No.76, Xi'an, ShaanXi, 710061, China.
Zhuangjie Guo *State Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China.
Jin Zhang *Department of Thoracic Surgery, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Diseases, China-Japan Friendship Hospital, Institute of Respiratory Medicine, Chinese Academy of Medical Sciences, Beijing, 100029, China.
Yidan GaoState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China.
Xuehan JiangState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China.
Haoshuai YangDepartment of Thoracic Surgery, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Diseases, China-Japan Friendship Hospital, Institute of Respiratory Medicine, Chinese Academy of Medical Sciences, Beijing, 100029, China.
Yufei HuState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China.
Hong ZhangState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China.
Wanlu SongState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China. song_wanlu@outlook.com.
Chaoyang LiangDepartment of Thoracic Surgery, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Diseases, China-Japan Friendship Hospital, Institute of Respiratory Medicine, Chinese Academy of Medical Sciences, Beijing, 100029, China. chaoyangliang@hotmail.com.
Peiran YangState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China. peiran.yang@foxmail.com.
Chen WangState Key Laboratory of Respiratory Health and Multimorbidity, Department of Physiology, Institute of Basic Medical Sciences, School of Basic Medicine, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, 100005, China.

Funding

Beijing Municipal Natural Science Foundation 7242096Chinese Academy of Medical Sciences Innovation Fund for Medical Sciences 2021-I2M-1-001National Natural Science Foundation of China 82270062Noncommunicable Chronic Diseases-National Science and Technology Major Project 2024ZD0528700Non-Profit Central Research Institute Fund of the Chinese Academy of Medical Sciences 2021-RC310-016the State Key Laboratory Special Fund 2060204
6 · The paper itself

Abstract

backgroundCombined pulmonary fibrosis and emphysema (CPFE) is a severe and progressive lung disease with limited therapeutic options and poor prognosis. CPFE manifests as emphysema and fibrosis in different lung regions and is frequently associated with pulmonary hypertension. Pulmonary vascular endothelial cells may regulate these processes, but their role in CPFE remains unclear.

methodsSingle-cell RNA sequencing and multiplex immunohistochemistry were performed on upper/lower lung tissues from CPFE patients and healthy controls. Cellular heterogeneity, gene expression, and intercellular communication networks were analyzed.

resultsThe upper lung of CPFE exhibited marked depletion and impaired function of endothelial cells, along with neutrophil accumulation and M1 macrophage-driven inflammation. Conversely, the lower lung of CPFE displayed higher proportions of ACKR1 + venous endothelial cells and enhanced angiogenesis. Endothelial cells demonstrated profibrotic signaling via THBS1-SDC4, PDGFB-PDGFRα, and JAG1-NOTCH3 signaling targeting epithelial cells, fibroblasts, and smooth muscle cells, respectively. These endothelial cells also exhibited strong interactions with macrophages through chemokines and adhesion molecules such as CCL14 and ICAM1, and expressed factors promoting M2 macrophage polarization. Multi-color staining confirmed the proximity of these endothelial cells with specific lung resident cells and immune cells, with clear spatial compartmentalization of endothelial cells with their target cell populations in the upper and lower lungs of CPFE.

conclusionsThis study provides a preliminary cellular characterization of CPFE, implicating endothelial cells as potential regulators of its regional pathology through angiocrine signaling and macrophage crosstalk. The findings provide novel mechanistic insights into the histopathological heterogeneity of CPFE and highlight these pathways as therapeutic targets.

Indexed as

Airway RemodelingEndothelial CellsLungPulmonary EmphysemaPulmonary FibrosisSequence Analysis, RNASingle-Cell AnalysisFemaleHumansMaleMiddle AgedSingle-Cell Gene Expression AnalysisCombined pulmonary fibrosis and emphysemaEmphysemaEndothelial cellsPulmonary fibrosisSingle-cell RNA sequencing

Identifiers

PMID41491179
PMCPMC12870540

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.