Evidence map›Paper›PMID 41486150›Full record

ArticleBMC plant biology2026

Transcriptome analysis reveals the mechanisms of flavonoid accumulation in different Morus alba L. varieties.

Tao Zhou, Yue Pan, Ming Wang, Shao-Li Fan, Ru-Xue Li, Lu Yang

Abstract read
In one paragraph

Article in BMC plant biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Transcriptome Analysis ofAnimals : an open access journal from MDPI · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tao Zhou *Xinjiang Uygur Autonomous Region Academy of Forestry, Ürümqi, 830000, China.
Yue Pan *Xinjiang Uygur Autonomous Region Academy of Forestry, Ürümqi, 830000, China.
Ming WangXinjiang Uygur Autonomous Region Academy of Forestry, Ürümqi, 830000, China.
Shao-Li FanXinjiang Uygur Autonomous Region Academy of Forestry, Ürümqi, 830000, China.
Ru-Xue LiXinjiang Uygur Autonomous Region Academy of Forestry, Ürümqi, 830000, China.
Lu YangXinjiang Uygur Autonomous Region Academy of Forestry, Ürümqi, 830000, China. yanglukitty127@163.com.

Funding

Key R&D projects in Xinjiang Uygur Autonomous Region 2023B02028-1Xinjiang Uygur Autonomous Region major special project 2023A02008-2
6 · The paper itself

Abstract

backgroundMorus alba L., a perennial woody plant with significant economic and ecological value, contains abundant phytochemicals, including flavonoids, which play crucial roles in plant defense and human health. Flavonoids are a diverse group of secondary metabolites with antioxidant, anti-inflammatory, and antimicrobial properties, and are widely found in plant tissues and contribute to both plant fitness and human nutrition.

resultsThrough comparative transcriptome analysis between Black Mulberry (HS) and Medicinal Mulberry (YS), we identified numerous differentially expressed genes (DEGs) associated with flavonoid biosynthesis. Key structural genes, including CHS1, CHI, F3H, F3’H, and ANS, as well as transcription factors (TFs) such as MYB306, BHLH106, and BHLH153, exhibited cultivar-specific expression patterns that strongly correlated with flavonoid accumulation during fruit development. Notably, the flavonoid content was consistently higher in YS than in HS, especially at later developmental stages. Furthermore, weighted gene co-expression network analysis (WGCNA) revealed a key module enriched with genes involved in flavonoid synthesis and related regulatory pathways, providing new insights into the transcriptional regulation of flavonoid accumulation in M. alba L.

conclusionsThe study extends the understanding of flavonoid biosynthesis in plants by highlighting the cultivar-specific regulation of key biosynthetic genes and transcription factors. The results offer a theoretical basis for improving M. alba L. varieties and enhancing their nutritional and medicinal values. By integrating multi-omics approaches, future research can further unravel the complex regulatory networks governing flavonoid accumulation and explore their applications in agriculture, food, and medicine.

Indexed as

FlavonoidsMorusTranscriptomeFruitGene Expression ProfilingGene Expression Regulation, PlantPlant ProteinsTranscription FactorsFlavonoidsPlant ProteinsTranscription FactorsFlavonoid accumulationFruit developmentMorus Alba L.Transcription factor (TF)Transcriptome

Identifiers

PMID41486150
PMCPMC12871004

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.