Evidence map›Paper›PMID 41485210›Full record

ArticleEcology letters2026

Negative Frequency-Dependent Selection Promotes Strain Structure in a Plant Pathogen.

Shuanger Li, Eric Laderman, Hanna Märkle, Yunze Yang, Joy Bergelson, Mercedes Pascual

Abstract read
In one paragraph

Article in Ecology letters, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shuanger LiDepartment of Biology, New York University, New York, New York, USA.
Eric LadermanDepartment of Biology, New York University, New York, New York, USA.
Hanna MärkleDepartment of Biology, New York University, New York, New York, USA.
Yunze YangDepartment of Biology, New York University, New York, New York, USA.ORCID https://orcid.org/0009-0006-4030-0851
Joy BergelsonDepartment of Biology, New York University, New York, New York, USA.
Mercedes PascualDepartment of Biology, New York University, New York, New York, USA.ORCID https://orcid.org/0000-0003-3575-7233

Funding

National Science Foundation, Division of Biological Infrastructure 2022049Simons Foundation 01308072TamkeenZegar Family Foundation
6 · The paper itself

Abstract

Specific recognition of microbial virulence factors (effectors) by host defence proteins can generate negative frequency-dependent selection (NFDS), enabling the maintenance of strain diversity. Our characterisation of 76 Midwestern US Pseudomonas syringae strains and 1104 global strains confirmed high strain diversity, but also revealed that strains are structured into similarity modules, consistent with core genome phylogeny but unexplained by host, location or genetic linkage. We developed a stochastic computational model that embraces the large variability now known to characterise effector repertoires. We show that NFDS can not only generate modular strain structure but is required to maintain modularity under genetic exchange, for which there is evidence in the data. These modules form through the emergence of groups of pathogens virulent to dominant hosts at a given time. Thus, eco-evolutionary dynamics contribute to strain coexistence through flux in the modules that represent niches within the host population.

Indexed as

Plant DiseasesPseudomonas syringaeSelection, GeneticGenetic VariationHost-Pathogen InteractionsPhylogenyVirulence FactorsVirulence Factorsmicrobial effectorsmodularity in strain similarity networkNLRsplant microbe coevolutionPseudomonas syringaeR‐genesstrain structure

Identifiers

PMID41485210
PMCPMC12765476

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.