Evidence map›Paper›PMID 41484955›Full record

ArticleBMC genomics2026

Genome-wide identification of the BBX gene family in kiwifruit and analysis of its expression responses to multiple types of stress.

Hailin Ren, Ping Tian, Rong Xu, Zhen Li, Hanbing Cai, Hongyun Li, Xiaozhen Liu, Hanyao Zhang

Abstract read
In one paragraph

Article in BMC genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

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No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hailin Ren *Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, 650224, China.
Ping Tian *Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, 650224, China.
Rong XuYuxi Normal University, Yuxi, 653100, China.
Zhen LiKey Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, 650224, China.
Hanbing CaiKey Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, 650224, China.
Hongyun LiChuxiong Lvjuren Biotechnology Co., Ltd, Chuxiong, 675014, China.
Xiaozhen LiuKey Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, 650224, China. 15198729095@swfu.edu.cn.
Hanyao ZhangKey Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, 650224, China. zhanghanyao@swfu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study systematically analyzed the BBX gene family in kiwifruit (Actinidia chinensis) to investigate its roles in abiotic stress responses. Bioinformatics analyses were performed, including gene localization, collinearity assessment, gene structure characterization, phylogenetic reconstruction, three-dimensional protein modeling, protein-protein interaction networks, and cis-acting element screening. These approaches elucidated the evolutionary relationships and structural features of the kiwifruit BBX genes. Transcriptome data revealed differential expression patterns under boron deficiency, salt stress, and cadmium stress, visualized through heatmaps. Quantitative real-time PCR validation confirmed that AcBBX4, AcBBX5, AcBBX15, AcBBX17, and AcBBX36 were significantly differentially expressed under all three stress conditions, suggesting their coordinated function in stress adaptation. Protein-protein interaction analysis identified AcBBX17 as a central hub in the regulatory network. Promoter analysis indicated that AcBBX17 contains a high proportion of methyl jasmonate responsive elements, and functional enrichment supported its involvement in the jasmonic acid signaling pathway. Based on these findings, a jasmonic acid-mediated regulatory model centered on AcBBX17 was proposed. In summary, the BBX gene family functions as key transcriptional regulators in plant development and stress response pathways, with this study providing specific insights into its role in kiwifruit abiotic stress tolerance.

Indexed as

ActinidiaGene Expression Regulation, PlantMultigene FamilyPlant ProteinsStress, PhysiologicalCyclopentanesGene Expression ProfilingGene Regulatory NetworksOxylipinsPhylogenyPromoter Regions, GeneticCyclopentanesOxylipinsPlant ProteinsAbiotic stressBBX genesJasmonic acidKiwifruitSignaling pathway

Identifiers

PMID41484955
PMCPMC12857142

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.