Evidence map›Paper›PMID 41484402›Full record

ArticleCellular and molecular life sciences : CMLS2026

Microbiome composition modulates the lethal outcome of Drosophila A virus infection.

Rubén González, Mauro Castelló-Sanjuán, Ottavia Romoli, Hervé Blanc, Hiroko Kobayashi, Jared Nigg, Maria-Carla Saleh

Abstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rubén GonzálezInstitut Pasteur, Université Paris Cité, Viruses and RNA Interference Unit, Paris, 75015, France. ruben.gonzalez-miguelez@pasteur.fr.ORCID http://orcid.org/0000-0001-9588-1127
Mauro Castelló-SanjuánInstitut Pasteur, Université Paris Cité, Viruses and RNA Interference Unit, Paris, 75015, France.ORCID http://orcid.org/0009-0002-7732-046X
Ottavia RomoliInstitut Pasteur, Université Paris Cité, Viruses and RNA Interference Unit, Paris, 75015, France.ORCID http://orcid.org/0000-0002-7608-2650
Hervé BlancInstitut Pasteur, Université Paris Cité, Viruses and RNA Interference Unit, Paris, 75015, France.ORCID http://orcid.org/0000-0002-2636-8642
Hiroko KobayashiDivision of Molecular Pathobiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Hokkaido, Japan.ORCID http://orcid.org/0000-0003-3348-733X
Jared NiggInstitut Pasteur, Université Paris Cité, Viruses and RNA Interference Unit, Paris, 75015, France.ORCID http://orcid.org/0000-0001-6386-0305
Maria-Carla SalehInstitut Pasteur, Université Paris Cité, Viruses and RNA Interference Unit, Paris, 75015, France. carla.saleh@pasteur.fr.ORCID http://orcid.org/0000-0001-8593-4117

Funding

Agence Nationale de la Recherche ANR-10-LABX-62-IBEIDAgence Nationale de la Recherche ANR-23-CE15-0038-01H2020 Marie Skłodowska-Curie Actions 101024099
6 · The paper itself

Abstract

Host-associated microbiomes can strongly influence viral infection outcomes, yet how minor variations in commensal bacterial composition modulate viral pathogenesis remain poorly understood. Here, we used Drosophila melanogaster to investigate how bacterial microbiome composition affects pathogenesis of enteric RNA viruses. Lactiplantibacillus plantarum supplementation increased bacterial microbiome diversity without altering total bacterial load, while Acetobacter pomorum supplementation had minimal impact on the bacterial microbiome. L. plantarum-enriched flies exhibited an additional ~ 15% reduction in lifespan from Drosophila A virus (DAV) infection despite showing reduced viral protein accumulation and similar viral RNA levels. The reduction in tolerance to viral infection required live bacteria and was observed only for DAV, as no change in mortality was observed with Nora virus or Drosophila C virus infections. Mechanistic investigations revealed that tolerance reduction occurs independently of transcriptional immune responses, as DAV-infected flies showed similar transcriptional profiles regardless of bacterial microbiome composition. Intestinal barrier function assays demonstrated that a large number of L. plantarum-supplemented flies died before developing signs of gut barrier disruption, suggesting that extra-intestinal mechanisms contribute to mortality; this interpretation is further supported by similar levels of intestinal damage markers observed in virus-infected flies under both microbiome conditions. Viral genomic sequencing ruled out microbiome-driven selection of more pathogenic viral variants, as no adaptive mutations were observed between microbiome conditions that could account for the differential pathogenesis. These findings describe how subtle shifts in microbiome composition modulate viral infection outcomes through pathways that operate independently of canonical immune responses, viral evolution, and intestinal damage.

Indexed as

Drosophila melanogasterGastrointestinal MicrobiomeMicrobiotaAcetobacterAnimalsLactiplantibacillus plantarumDisease toleranceDrosophila melanogasterHost-virus interactionsLactiplantibacillus plantarumMicrobiomeViral infections

Identifiers

PMID41484402
PMCPMC12819904

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.