Evidence map›Paper›PMID 41484392›Full record

ArticleCommunications biology2026

Brain-aligning of semantic vectors improves neural decoding of visual stimuli.

Shirin Vafaei, Ryohei Fukuma, Takufumi Yanagisawa, Huixiang Yang, Satoru Oshino, Naoki Tani, Hui Ming Khoo, Hidenori Sugano, Yasushi Iimura, Hiroharu Suzuki and 3 more

Abstract read
In one paragraph

Article in Communications biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

13 authors.

Shirin VafaeiDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan.ORCID http://orcid.org/0009-0007-6925-9837
Ryohei FukumaDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan.ORCID http://orcid.org/0000-0002-3316-9561
Takufumi YanagisawaDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan. tyanagisawa@nsurg.med.osaka-u.ac.jp.ORCID http://orcid.org/0000-0002-2057-0612
Huixiang YangDepartment of Neuroinformatics, The University of Osaka Graduate School of Medicine, Suita, Japan.
Satoru OshinoDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan.ORCID http://orcid.org/0000-0002-4248-2322
Naoki TaniDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan.ORCID http://orcid.org/0000-0003-2169-135X
Hui Ming KhooDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan.ORCID http://orcid.org/0000-0002-4039-0520
Hidenori SuganoDepartment of Neurosurgery, Juntendo University, Tokyo, Japan.
Yasushi IimuraDepartment of Neurosurgery, Juntendo University, Tokyo, Japan.
Hiroharu SuzukiDepartment of Neurosurgery, Juntendo University, Tokyo, Japan.
Madoka NakajimaDepartment of Neurosurgery, Juntendo University, Tokyo, Japan.ORCID http://orcid.org/0000-0002-8496-2973
Kentaro TamuraDepartment of Neurosurgery, Nara Medical University, Kashihara, Japan.
Haruhiko KishimaDepartment of Neurosurgery, Graduate School of Medicine, The University of Osaka, Suita, Japan.ORCID http://orcid.org/0000-0002-9041-2337

Funding

MEXT | Japan Science and Technology Agency (JST) JPMJCR18A5MEXT | Japan Science and Technology Agency (JST) JPMJCR24U2MEXT | Japan Science and Technology Agency (JST) JPMJMS2012MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05705MEXT | Japan Society for the Promotion of Science (JSPS) JP26560467
6 · The paper itself

Abstract

The development of algorithms to accurately decode neural information has long been a research focus in the field of neuroscience. Brain decoding typically involves training machine learning models to map neural data onto a preestablished vector representation of stimulus features. These vectors are usually derived from image- and/or text-based feature spaces. Nonetheless, the intrinsic characteristics of these vectors might fundamentally differ from those that are encoded by the brain, limiting the ability of decoders to accurately learn this mapping. To address this issue, we propose a framework, called brain-aligning of semantic vectors, that fine-tunes pretrained feature vectors to better align with the structure of neural representations of visual stimuli in the brain. We trained this model with functional magnetic resonance imaging (fMRI) and then performed zero-shot brain decoding on fMRI, magnetoencephalography (MEG), and electrocorticography (ECoG) data. fMRI-based brain-aligned vectors improved decoding performance across all three neuroimaging datasets when accuracy was determined by calculating the correlation coefficients between true and predicted vectors. Additionally, when decoding accuracy was determined via stimulus identification, this accuracy increased in specific category types; improvements varied depending on the original vector space that was used for brain-alignment, and consistent improvements were observed across all neuroimaging modalities.

Indexed as

BrainBrain MappingSemanticsAdultAlgorithmsElectrocorticographyFemaleHumansMachine LearningMagnetic Resonance ImagingMagnetoencephalographyMalePhotic Stimulation

Identifiers

PMID41484392
PMCPMC12891520

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.