Evidence map›Paper›PMID 41484114›Full record

ArticleNPJ vaccines2026

Assessment of SARS-CoV-2 immune escape using antigenic cartography combined with experimental challenge studies.

Merel R Te Marvelde, Anna Z Mykytyn, Edwin J B Veldhuis Kroeze, Alexandre H J Bouffier, Debby van Eck-Schipper, Petra van den Doel, Kim Handrejk, Björn Koel, Melanie Rissmann, Bart L Haagmans

Abstract read
In one paragraph

Article in NPJ vaccines, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Merel R Te MarveldeDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Anna Z MykytynDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Edwin J B Veldhuis KroezeDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Alexandre H J BouffierDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Debby van Eck-SchipperDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Petra van den DoelDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Kim HandrejkDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Björn KoelDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands.
Melanie RissmannDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands. m.rissmann@erasmusmc.nl.
Bart L HaagmansDepartment of Viroscience, Erasmus Medical Center, Rotterdam, The Netherlands. b.haagmans@erasmusmc.nl.

Funding

EU4Health Program, European Union 101102733
6 · The paper itself

Abstract

The disease burden of COVID-19 significantly decreased with the implementation of vaccines. However, SARS-CoV-2 variants that escape vaccine induced immunity continue to emerge and may pose a risk to public health. While vaccine updates are available, it remains uncertain whether they are required for full protection. Here, we antigenically characterized SARS-CoV-2 variants JN.1, KP.2, KP.3.1.1, XEC and LP.8.1 by antigenic cartography and evaluated in vivo protection of JN.1 vaccination in hamsters. Antigenic cartography revealed that these variants are antigenically closely related. In vivo experiments showed that JN.1 vaccination blocked viral replication and inflammation in the lower respiratory tract of JN.1, KP.2 and KP.3.1.1 infected animals. However, despite close antigenic proximity, KP.3.1.1 infected JN.1 vaccinated animals showed evidence of viral replication in the upper respiratory tract, indicative for immune escape. These data demonstrate the strength of combining antigenic cartography with experimental challenge studies to study SARS-CoV-2 immune escape for vaccine updates.

Identifiers

PMID41484114
PMCPMC12847947

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.