Evidence map›Paper›PMID 41482574›Full record

ArticleNature chemistry2026

Global profiling of arginine reactivity and ligandability in the human proteome.

Yuena Wang, Tao Hu, Lin Zhu, Shaoshuai Xie, Xi Yang, Caifeng Xu, Yansheng Zhai, Youming Li, Xiaoyan Huang, Bo Yang and 1 more

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Article in Nature chemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yuena Wang *Institute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.ORCID 0000-0002-7254-2736
Tao Hu *Institute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.ORCID 0009-0000-1915-4833
Lin ZhuInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.
Shaoshuai XieInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.ORCID 0000-0002-4391-4676
Xi YangInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.
Caifeng XuInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.
Yansheng ZhaiInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.
Youming LiInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.
Xiaoyan HuangInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China.
Bo YangState Key Laboratory for Crop Stress Resistance and High-Efficiency Production, College of Life Sciences, Northwest A & F University, Yangling, China.
Gang LiInstitute of Chemical Biology, Shenzhen Bay Laboratory, Shenzhen, China. ligang@szbl.ac.cn.ORCID 0000-0003-4434-4756

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the crucial biological functions of arginine, its reactivity and ligandability within the human proteome remain largely unexplored. Here we apply activity-based protein profiling (ABPP) with phenylglyoxal-based chemical probes to map arginine reactivity globally. Screening phenylglyoxal derivatives identified a probe with enhanced coverage and selectivity, enabling quantification of 4,606 arginine sites across human cell lines. Among these, critical residues regulate liquid-liquid phase separation. Arginine reactivity was further assessed by on-beads reductive dimethylation proteomics, revealing a subset of hyper-reactive sites. Competitive fragment screening using data-independent acquisition ABPP (DIA-ABPP) generated a ligandability map of arginine residues across 60 dicarbonyl compounds. This dataset revealed ligandable arginines that modulate protein activity, in particular protein-protein interactions, highlighting potential covalent drug targets. Together, this work provides a proteome-wide profile of arginine reactivity and ligandability, offering insights into the functional landscape of arginines and expanding the scope of covalent drug discovery to include arginine-targeting molecules.

Indexed as

ArginineProteomeHumansLigandsProteomicsArginineLigandsProteome

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.