ArticleDatabase : the journal of biological databases and curation2025
An approach to making life sciences FAIR-FAIR-DS as a tool for Aspergillus fumigatus.
Article in Database : the journal of biological databases and curation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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6 authors.
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Abstract
Adhering to Findable, Accessible, Interoperable, and Reusable (FAIR) principles ensures that data is shared in ways that maximize reusability. However, not all researchers in biological fields, particularly those that rely on manual data entry, have embraced these principles, particularly when it comes to adhering to relevant ontologies. This hampers data sharing due to missing metadata, limiting reuse. This study addresses the production of FAIR data for mycology, a field characterized by high manual data entry demands. For this field, we propose specific data standards to enhance reusability in the Aspergillus fumigatus field and beyond, emphasizing their importance for fostering collaboration and accelerating scientific progress. We adopted the FAIR-Data Station (FAIR-DS) solution to this new domain and demonstrated how to improve the FAIRification of new types of complex life science datasets. For individual researchers, FAIR-DS simplifies data uploads to repositories while ensuring critical metadata is preserved. Following our approach, we have converted two types of datasets-spore counts and a compost monitoring programme on Dutch farms-into FAIR ontology-compliant formats and published them as open data.
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