Evidence map›Paper›PMID 41480072›Full record

ArticleFrontiers in public health2025

Transdisciplinary training to address challenges in genomic epidemiology of infectious diseases.

Samuel L Hong, Marie Stockman, Jorge Ricardo Nova Blanco, Casper Van Cleemput, Ambroise Ahouidi, Blas Armién, Ana Bento, Nena Bollen, César Conde Pereira, Carla Freitas and 13 more

Abstract read
In one paragraph

Article in Frontiers in public health, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Samuel L HongLaboratory of Evolutionary and Computational Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Marie StockmanDepartment of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Institute for the Future, KU Leuven, Leuven, Belgium.
Jorge Ricardo Nova BlancoDepartment of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Institute for the Future, KU Leuven, Leuven, Belgium.
Casper Van CleemputDepartment of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Institute for the Future, KU Leuven, Leuven, Belgium.
Ambroise Ahouidi *Institut de Recherche en Santé, de Surveillance Epidemiologique et de Formations (IRESSEF), Dakar, Senegal.
Blas Armién *Departamento de Investigación de Enfermedades Emergentes y Zoonóticas - DIEEZ-ICGES, Instituto Conmemorativo Gorgas de Estudios de la Salud, Ciudad de Panamá, Panama, Panama.
Ana Bento *Department of Public and Ecosystem Health, Cornell University, Ithaca, NY, United States.
Nena Bollen *Laboratory of Evolutionary and Computational Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
César Conde Pereira *Dirección del Laboratorio Nacional de Salud, Ministerio de Salud Pública y Asistencia Social, Ciudad de Guatemala, Villa Nueva, Guatemala.
Carla Freitas *General Coordination of Public Health Laboratories, Health and Environmental Surveillance Secretariat, Ministry of Health of Brazil, Brasilia, Brazil.
Marije Hofstra *Centre for Epidemic Response Innovation (CERI), School for Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.
Michael R Jordan *Collaboratory for Emerging Infectious Diseases and Response, Tufts University, Boston, MA, United States.
Simone Kashima *Blood Center of Ribeirão Preto, São Paulo, Brazil.
Crhistinne Cavalheiro Maymone Gonçalves *Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil.
Carlos Frederico Campelo de Albuquerque E Melo *Panamerican Health Organization, World Health Organization, Brasilia, Brazil.
Kanika Nahata *Laboratory of Evolutionary and Computational Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Elaine Cristina de Oliveira *Central Public Health Laboratory, Mato Grosso State Health Department, Campo Grande, Brazil.
Liz Parra *Panamerican Health Organization, World Health Organization, Guatemala, Guatemala.
Carlos Saenz *Nicaragua Ministry of Health, Managua, Nicaragua.
Walban de Souza *Labor - Health Supply, São Paulo, Brazil.
Maja Stanojevic *Institute of Microbiology and Immunology, University of Belgrade Faculty of Medicine, Belgrade, Serbia.
Peter MacGarr RabinowitzDepartment of Environmental and Occupational Health Sciences, University of Washington, Seattle, WA, United States.
Anne-Mieke VandammeDepartment of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Institute for the Future, KU Leuven, Leuven, Belgium.

Funding

World Health Organization 001
6 · The paper itself

Abstract

During the COVID-19 pandemic, the emergence and detection of SARS-CoV-2 variants of concern highlighted the pivotal role of genomic epidemiology in public health decision and policy making. The pandemic also revealed a need for genomic epidemiologists to effectively engage with a broader audience, including policymakers and the public. To address this need, we introduced a new transdisciplinary training workshop, "From Trees to Public Health Policy," at the Virus Evolution and Molecular Epidemiology (VEME) 2022 workshop in Panama City, designed to foster an enhanced understanding of the current challenges translating the results of genomic epidemiology into public health decision-making. Transdisciplinarity provides a collaborative problem-solving approach that integrates multiple disciplines and stakeholders to address complex and difficult to define problems, often referred to as "wicked problems." We argue that training in transdisciplinary approaches within genomic epidemiology will more effectively prevent, prepare for, and mitigate future pandemic risks. Here, we introduce this new module and methodology, along with detailed output, reflections on its implementation and outcomes, as well as areas for improvement for future iterations of the workshop. Workshop participants (

Indexed as

Communicable DiseasesCOVID-19GenomicsMolecular EpidemiologyPublic HealthEducationHumansPandemicsSARS-CoV-2capacity buildingCOVID-19genomic epidemiologypandemic preparednesssystems thinkingtransdisciplinary training

Identifiers

PMID41480072
PMCPMC12753939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.