Evidence map›Paper›PMID 41474623›Full record

ArticleCell reports2026

Phage induction of Staphylococcus aureus pathogenicity islands promotes the CRISPR-Cas adaptive immune response.

Dalton V Banh, Gregory W Goldberg, Luciano A Marraffini

Abstract read
In one paragraph

Article in Cell reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Dalton V BanhLaboratory of Bacteriology, The Rockefeller University, New York, NY, USA; Weill Cornell/Rockefeller/Sloan Kettering Tri-Institutional MD-PhD Program, New York, NY, USA.
Gregory W GoldbergLaboratory of Bacteriology, The Rockefeller University, New York, NY, USA.
Luciano A MarraffiniLaboratory of Bacteriology, The Rockefeller University, New York, NY, USA; Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA. Electronic address: marraffini@rockefeller.edu.

Funding

Generation of immunological memory by CRISPR-Cas systemsDP1GM128184 · NIGMS · ROCKEFELLER UNIVERSITY · PI MARRAFFINI, LUCIANO A · 2017 to 2021
$5.9M
Spacer acquisition during the type III-A CRISPR-Cas immune responseR01GM149834 · NIGMS · ROCKEFELLER UNIVERSITY · PI Luciano A Marraffini · 2023 to 2026
$1.7M
Elucidating how CRISPR-Cas Modulates the Spread of S. aureus Pathogenicity IslandsF30AI157535 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI BANH, DALTON VAN · 2021 to 2024
$203k
NIAID NIH HHS F30 AI157535NIGMS NIH HHS DP1 GM128184NIGMS NIH HHS R01 GM149834
6 · The paper itself

Abstract

Staphylococcus aureus pathogenicity islands (SaPIs) are mobile genetic elements carrying virulence genes that spread upon infection by helper phages that induce their transfer. Staphylococci also carry type II and III CRISPR-Cas systems that mount an adaptive immune response against phages through the acquisition of spacer sequences from viral genomes, directing Cas nucleases to their targets. Whether and how SaPIs and CRISPR interact with each other during helper phage infection is not known. Here we report that, as a result of the packaging of incomplete helper phage genomes into SaPI particles, defective viral DNA delivered into new hosts stimulates spacer acquisition in both CRISPR types. Once immunized, staphylococci target the helper phage and prevent SaPI mobilization. Our work reveals an unexpected synergy between CRISPR-Cas systems and SaPIs that enhances antiphage immunity and could favor the retention of beneficial elements within the population.

Indexed as

Adaptive ImmunityBacteriophagesCRISPR-Cas SystemsGenomic IslandsStaphylococcus aureusStaphylococcus PhagesAnimalsMiceadaptive immunityCP: microbiologyCRISPRpathogenicity islandphagespacer acquisitionStaphylococcus

Identifiers

PMID41474623
PMCPMC12931967

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.