Evidence map›Paper›PMID 41472230›Full record

ArticleViruses2025

Development and Validation of a Commercial TaqMan-Based RT-qPCR Kit for Rotavirus and Norovirus Detection in the Brazilian Acute Diarrhea Surveillance Network.

Geison Cambri, Thiago Jacomasso, Fernanda Marcicano Burlandy, Fábio Correia Malta, Alexandre Madi Fialho, Audrey Cilli, Simone Guadagnucci, Dielle Monteiro Teixeira, Patrícia Santos Lobo, Hugo Reis Resque and 7 more

Abstract readValidation StudyMulticenter Study
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Wastewater-based surveillance of norovirus GI and GII: Comparative performance of commercial and in-house RT-qPCR Assays.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Geison CambriMolecular Biology Institute of Paraná (IBMP), Curitiba 81350-010, PR, Brazil.
Thiago JacomassoMolecular Biology Institute of Paraná (IBMP), Curitiba 81350-010, PR, Brazil.ORCID 0000-0002-1348-1523
Fernanda Marcicano BurlandyLaboratory of Comparative and Environmental Virology (LVCA), Oswaldo Cruz Institute, Oswaldo Cruz Foundation (Fiocruz), Av. Brasil 4365, Rio de Janeiro 21040-360, RJ, Brazil.ORCID 0000-0001-9933-7161
Fábio Correia MaltaLaboratory of Comparative and Environmental Virology (LVCA), Oswaldo Cruz Institute, Oswaldo Cruz Foundation (Fiocruz), Av. Brasil 4365, Rio de Janeiro 21040-360, RJ, Brazil.ORCID 0000-0001-9980-185X
Alexandre Madi FialhoLaboratory of Comparative and Environmental Virology (LVCA), Oswaldo Cruz Institute, Oswaldo Cruz Foundation (Fiocruz), Av. Brasil 4365, Rio de Janeiro 21040-360, RJ, Brazil.ORCID 0000-0002-5412-3896
Audrey CilliEnteric Diseases Laboratory (LDE), Virology Center (CV), Adolfo Lutz Institute (IAL), Av. Dr Arnaldo, 355, São Paulo 01246-900, SP, Brazil.ORCID 0000-0002-1642-5252
Simone GuadagnucciEnteric Diseases Laboratory (LDE), Virology Center (CV), Adolfo Lutz Institute (IAL), Av. Dr Arnaldo, 355, São Paulo 01246-900, SP, Brazil.
Dielle Monteiro TeixeiraLaboratory of Gastroenteric Viruses (LVG), Virology Section, Evandro Chagas Institute, Secretariat of Health Surveillance and Environment, Brazilian Ministry of Health, Ananindeua 67030-000, PA, Brazil.
Patrícia Santos LoboLaboratory of Gastroenteric Viruses (LVG), Virology Section, Evandro Chagas Institute, Secretariat of Health Surveillance and Environment, Brazilian Ministry of Health, Ananindeua 67030-000, PA, Brazil.ORCID 0000-0003-0209-6969
Hugo Reis ResqueLaboratory of Gastroenteric Viruses (LVG), Virology Section, Evandro Chagas Institute, Secretariat of Health Surveillance and Environment, Brazilian Ministry of Health, Ananindeua 67030-000, PA, Brazil.
Lucia Helena BertoGeneral Coordination of Public Health Laboratories (CGLab), Ministry of Health, Federal District, Brasília 70058-900, DF, Brazil.
Alessandro AfornaliMolecular Biology Institute of Paraná (IBMP), Curitiba 81350-010, PR, Brazil.
Fabricio Klerynton MarchiniMolecular Biology Institute of Paraná (IBMP), Curitiba 81350-010, PR, Brazil.
Irina Nastassja RiedigerMolecular Biology Institute of Paraná (IBMP), Curitiba 81350-010, PR, Brazil.ORCID 0000-0002-4804-0429
Luana Silva SoaresLaboratory of Gastroenteric Viruses (LVG), Virology Section, Evandro Chagas Institute, Secretariat of Health Surveillance and Environment, Brazilian Ministry of Health, Ananindeua 67030-000, PA, Brazil.ORCID 0000-0001-9509-4019
Rita de Cássia Compagnoli CarmonaEnteric Diseases Laboratory (LDE), Virology Center (CV), Adolfo Lutz Institute (IAL), Av. Dr Arnaldo, 355, São Paulo 01246-900, SP, Brazil.ORCID 0000-0002-9174-3234
Tulio Machado FumianLaboratory of Comparative and Environmental Virology (LVCA), Oswaldo Cruz Institute, Oswaldo Cruz Foundation (Fiocruz), Av. Brasil 4365, Rio de Janeiro 21040-360, RJ, Brazil.ORCID 0000-0001-9654-0172

Funding

CNPq (Conselho Nacional de Desenvolvimento Científico e Tecnológico) CNPq PROEP/IOC 441653/2024-3Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro-FAPERJ 260003/000530/2023
6 · The paper itself

Abstract

Acute gastroenteritis (AGE) is a major cause of illness and death in children under five, especially in low- and middle-income countries, and rotavirus A (RVA) and norovirus are the leading viral agents. The present study aimed to describe the development of a commercial multiplex TaqMan-based RT-qPCR assay to detect those viruses to enhance surveillance and public health responses in Brazil. The assay validation involved optimizing primers and probes for multiplex RT-qPCR, assessing analytical sensitivity, and confirming specificity. A multicenter pilot study across Brazil's AGE surveillance network assessed the assay's performance. The IBMP NAT assay demonstrated high specificity and sensitivity for detecting RVA and norovirus GI and GII. No cross-reactivity was observed. LoD95 values were low: 18.6 (GI), 71.2 (GII), and 12.3 (RVA) copies/reaction. In 379 clinical samples, diagnostic sensitivity and specificity exceeded 96% for all targets. The assay showed strong reproducibility across operators and instruments. Stability tests confirmed consistent performance under freeze-thaw, transport, and storage conditions. Compared to in-house RT-qPCR, the IBMP NAT test yielded lower Ct values, indicating improved detection of low viral loads. The IBMP NAT Kit significantly advances molecular diagnostics, enabling rapid, sensitive, and reliable detection of RVA and norovirus in fecal specimens. It strengthens public health surveillance and supports timely responses to AGE outbreaks, helping reduce disease burden in vulnerable populations.

Indexed as

Caliciviridae InfectionsDiarrheaGastroenteritisNorovirusReal-Time Polymerase Chain ReactionRotavirusRotavirus InfectionsAcute DiseaseBrazilChild, PreschoolEpidemiological MonitoringFecesHumansInfantPilot ProjectsReagent Kits, DiagnosticReagent Kits, DiagnosticAcute gastroenteritisdiagnosticnorovirusquantitative PCRrotavirus

Identifiers

PMID41472230
PMCPMC12737532

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.