Evidence map›Paper›PMID 41469930›Full record

ArticleAntimicrobial resistance and infection control2025

Intestinal colonisation with extended-spectrum beta-lactamase-producing Enterobacterales and the impact of selected factors on intestinal colonisation duration: a prospective cohort study.

Dragana Drinković, David Holland, Lifeng Zhou, Susan Taylor, Hasan Bhally, Arlo Upton, Scott Beatson, Simon Briggs

Abstract read
In one paragraph

Article in Antimicrobial resistance and infection control, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dragana DrinkovićMicrobiology Department, Health New Zealand Waitematā, Auckland, New Zealand. Dragana.Drinkovic@waitematadhb.govt.nz.ORCID 0000-0002-9546-5737
David HollandInfectious Diseases Department, Health New Zealand Counties Manukau, Auckland, New Zealand.
Lifeng ZhouPlanning, Funding and Outcomes, Health New Zealand Te Whatu Ora, Auckland, New Zealand.
Susan TaylorMicrobiology Department, Middlemore Hospital Laboratory, Health New Zealand Counties Manukau, Auckland, New Zealand.ORCID 0009-0001-0322-8276
Hasan BhallyInfectious Diseases Department, Health New Zealand Waitematā, Auckland, New Zealand.
Arlo UptonAwanui Labs, Auckland, New Zealand.
Scott BeatsonAustralian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.ORCID 0000-0002-1806-3283
Simon BriggsInfectious Diseases Department, Health New Zealand Te Toka Tumai Auckland, Auckland, New Zealand.ORCID 0000-0002-4217-4274

Funding

Auckland Medical Research Foundation Grant number 7112007
6 · The paper itself

Abstract

introductionWe conducted a prospective cohort study of patients with newly acquired extended-spectrum beta-lactamase-producing Enterobacterales (ESBLPE) intestinal colonisation (termed "ESBLPE colonisation") in two public hospitals between January 2013 and October 2016. We evaluated the duration of ESBLPE colonisation and the impact of selected factors on this duration.

methodsPatient data and faeces samples were collected on enrolment and three monthly for 2 years. Standard laboratory methods were used for ESBLPE identification and susceptibility testing. Whole-genome sequencing of isolates was performed determining sequence type, plasmid replicons, antimicrobial resistance genes, virulence factor genes and phylogenetic relationships.

resultsThe median duration of ESBLPE colonisation for the 102 patients was 544 days (range 77-730 days, interquartile range 220-730 days). After one year and at the end of follow up, 61% and 23.4% of patients respectively remained ESBLPE colonised. The same strain of ESBLPE, colonised 70.2% (33/47) patients colonised with Escherichia coli and 70.7% (29/42) patients colonised with Klebsiella pneumoniae. Prolonged ESBLPE colonisation was associated with age ≥ 75 years (HR 0.46, 95% CI 0.23-0.90), an increased intensity of hospitalisation (P = 0.0036), E. coli phylogroup B2 (P = 0.0142), E. coli harbouring bla

conclusionsIt is likely that combinations of multiple patient and bacterial factors influence the duration of ESBLPE colonisation. This prolonged duration of ESBLPE colonisation highlights the importance of infection control and public health measures to decrease the acquisition and spread of ESBLPE.

Indexed as

beta-LactamasesEnterobacteriaceaeEnterobacteriaceae InfectionsIntestinesAgedAged, 80 and overAnti-Bacterial AgentsEscherichia coliFecesFemaleHumansKlebsiella pneumoniaeMaleMicrobial Sensitivity TestsMiddle AgedPhylogenyAnti-Bacterial Agentsbeta-LactamasesVirulence FactorsEscherichia coliKlebsiella pneumoniaeWhole-genome sequencing

Identifiers

PMID41469930
PMCPMC12866355

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.