Evidence map›Paper›PMID 41469545›Full record

ArticleMolecular medicine (Cambridge, Mass.)2025

CSF metabolomic signature during therapy for childhood acute lymphoblastic leukemia predicts subsequent working memory impairment.

Jeremy Willekens, Sameera Ramjan, Stephen A Sands, Yongkyu Park, Nirajan K C, Melissa A Burns, Jennifer J G Welch, Justine Kahn, Kara M Kelly, Thai-Hoa Tran and 5 more

Registry-linked trialAbstract read
In one paragraph

Article in Molecular medicine (Cambridge, Mass.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT03020030 (Treatment of Newly Diagnosed Acute Lymphoblastic Leukemia in Children and Adolescents), which is not on this map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT03020030 phase3active not recruitingnot on this map

Treatment of Newly Diagnosed Acute Lymphoblastic Leukemia in Children and Adolescents

TypeinterventionalSponsorDana-Farber Cancer InstituteRan2017 to 2034Enrolled560ConditionsAcute Lymphoblastic Leukemia, PediatricArmsPegaspargase, Erwinia asparaginase, Cyclophosphamide, CYTARABINE, DASATINIB
3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Jeremy WillekensRutgers Cancer Institute, Division of Pediatric Hematology/Oncology, New Brunswick, NJ, USA. jw1327@cinj.rutgers.edu.
Sameera RamjanDepartment of Psychiatry & Behavioral Sciences, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Stephen A SandsDepartment of Psychiatry & Behavioral Sciences, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Yongkyu ParkRutgers Cancer Institute, Division of Pediatric Hematology/Oncology, New Brunswick, NJ, USA.
Nirajan K CRutgers Cancer Institute, Division of Pediatric Hematology/Oncology, New Brunswick, NJ, USA.
Melissa A BurnsDana-Farber/Boston Children's Cancer and Blood Disorders Center; Harvard Medical School, Boston, MA, USA.
Jennifer J G WelchDivision of Pediatric Hematology/Oncology, Alpert School of Medicine, Brown University, Providence, RI, USA.
Justine KahnDivision of Pediatric Hematology, Oncology and Stem Cell Transplantation, Columbia University Medical Center, New York, NY, USA.
Kara M KellyDepartment of Pediatrics, Roswell Park Comprehensive Cancer Center, University at Buffalo Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY, USA.
Thai-Hoa TranDivision of Pediatric Hematology Oncology, Charles-Bruneau Cancer Center, CHU Sainte-Justine, Université de Montréal, Montréal, Québec, Canada.
Bruno MichonCentre Hospitalier Universitaire de Quebec, Quebec City, QC, Canada.
Lisa GennariniChildren's Hospital at Montefiore, Bronx, NY, USA.
Andrew PlaceDana-Farber/Boston Children's Cancer and Blood Disorders Center; Harvard Medical School, Boston, MA, USA.
Lewis B SilvermanDana-Farber/Boston Children's Cancer and Blood Disorders Center; Harvard Medical School, Boston, MA, USA.
Peter D ColeRutgers Cancer Institute, Division of Pediatric Hematology/Oncology, New Brunswick, NJ, USA.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Identifying children with subclinical neurocognitive decline and susceptibility to oxidative damage during the early months of therapy for ALLR01CA220568 · NCI · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI COLE, PETER D., SANDS, STEPHEN ALAN · 2018 to 2022
$3.4M
NCI NIH HHS P30 CA008748NCI NIH HHS R01 CA220568
6 · The paper itself

Abstract

backgroundAlthough typically curative, treatment for pediatric acute lymphoblastic leukemia (ALL) is associated with neurotoxicity and leads to chemotherapy-related cognitive impairment (CRCI) in 40–70% of survivors. Cerebrospinal fluid (CSF), which is routinely collected during intrathecal chemotherapy, offers a direct window into brain metabolism. This study characterizes longitudinal metabolic changes in the CSF of pediatric patients undergoing chemotherapy for ALL.

methodsCSF samples from 45 pediatric patients enrolled on the multi-institutional Dana-Farber Cancer Institute (DFCI) ALL Consortium Protocol 16–001 were collected at five standardized timepoints over the first 20 weeks of treatment and analyzed using untargeted metabolomics. Cognitive outcomes were assessed post-treatment using age-appropriate Wechsler Intelligence scales, with the Working Memory Index (WMI) serving as the primary cognitive measure. Patients with WMI scores at least one standard deviation above (n = 21) or below (n = 24) the mean were selected for metabolomic comparison. This study constitutes an exploratory aim of the 16–001 clinical trial.

resultsOur analysis revealed a profound reorganization of the CSF metabolome during the first 18 days of treatment, spanning the induction phase of chemotherapy and early leukemia remission. This shift was characterized by alterations in amino acid, phospholipid, and one-carbon metabolism. Moreover, we identified a lipid-rich metabolomic signature predictive of low post-treatment WMI, implicating metabolic dysregulation in CRCI susceptibility.

conclusionsThese findings highlight the dynamic impact of chemotherapy on the CSF metabolome and support its utility as a matrix for monitoring neurotoxicity during pediatric ALL therapy. CSF metabolomics may enable the early identification of patients at risk for CRCI through predictive biomarkers and guide future neuroprotective interventions. Trial registration: Dana-Farber Cancer Institute ALL Consortium Protocol 16–001, clinicaltrials.gov ID NCT03020030; study start date 03/03/2017.

Indexed as

Chemotherapy-Related Cognitive ImpairmentMemory, Short-TermMetabolomePrecursor Cell Lymphoblastic Leukemia-LymphomaAdolescentBiomarkersChildChild, PreschoolFemaleHumansMaleMetabolomicsBiomarkersBiomarkerCerebrospinal fluidChemobrainChemotherapy-Related Cognitive ImpairmentGlycerophospholipid metabolismMetabolomicsNeurocognitive functioningPediatric Acute Lymphoblastic LeukemiaSurvivorship

Identifiers

PMID41469545
PMCPMC12865937

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.