Evidence map›Paper›PMID 41468439›Full record

ArticlePloS one2025

Genomic insights into the expansion of meropenem-resistant GPSC1-CC320 Streptococcus pneumoniae serotype 19A isolates from children under 5 years of age with invasive infections, 2018-2024.

Jin Lee, Jungsun Park, Tae-Min La, Ji-Yeon Hyeon, Hwanhee Kim, Seo Yeon Ko, Dong Hyeok Kim, Jaeil Yoo, Junyoung Kim

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jin LeeDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.
Jungsun ParkDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.
Tae-Min LaCollege of Veterinary Medicine, Konkuk University, Seoul, South Korea.
Ji-Yeon HyeonCollege of Veterinary Medicine, Konkuk University, Seoul, South Korea.
Hwanhee KimDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.
Seo Yeon KoDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.
Dong Hyeok KimDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.
Jaeil YooDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.
Junyoung KimDivision of Bacterial Diseases, Department of Laboratory Diagnosis and Analysis, Korea Disease Control and Prevention Agency, Cheongju, South Korea.ORCID https://orcid.org/0000-0003-3368-291X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global rise of multidrug-resistant (MDR) Streptococcus pneumoniae serotype 19A despite widespread pneumococcal conjugate vaccine (PCV) use poses an emerging challenge for pediatric infectious disease control. In South Korea, the detection of serotype 19A initially declined following PCV13 implementation, but it has recently re-emerged, raising concerns over the evolution and persistence of high-risk clones. We investigated invasive serotype 19A isolates recovered from children under five years of age between 2018 and 2024. Antimicrobial susceptibility testing and whole-genome sequencing (WGS) were conducted to characterize resistance mechanisms, clonal structure, and phylogenetic relationships. Among the 104 invasive pneumococcal isolates, 11 (10.6%) were identified as serotype 19A. All of these belonged to GPSC1/CC320 and were classified as ST320 or ST6400. These isolates exhibited resistance to meropenem but retained susceptibility to cefotaxime, carrying a conserved pbp1a-13, pbp2b-11, and pbp2x-16 combination. Phylogenetic analysis revealed four distinct subclades among the South Korean isolates, each showing high similarity to international strains. To our knowledge, this is the first genomic study of meropenem-resistant 19A in children from South Korea. Our findings suggest that the resurgence of 19A is driven by stable, high-risk MDR. These results underscore the need for clone-level genomic surveillance to preempt emerging threats and inform next-generation vaccine and antibiotic strategies.

Indexed as

Anti-Bacterial AgentsDrug Resistance, Multiple, BacterialMeropenemPneumococcal InfectionsStreptococcus pneumoniaeChild, PreschoolFemaleGenome, BacterialHumansInfantMaleMicrobial Sensitivity TestsPhylogenyPneumococcal VaccinesRepublic of KoreaSerogroupAnti-Bacterial AgentsMeropenemPneumococcal Vaccines

Identifiers

PMID41468439
PMCPMC12752945

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.