Evidence map›Paper›PMID 41467186›Full record

ArticleiScience2025

Optogenetic interrogation of the zebrafish lateral line reveals brain-wide neural circuits involved in pattern separation.

Nicolas Velez-Angel, Sihao Lu, Brian Fabella, Caleb C Reagor, Holland R Brown, Yuriria Vázquez, Adrian Jacobo, A J Hudspeth

Abstract read
In one paragraph

Article in iScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Whole-body central processing of lateral line inputs encodes flow direction relative to the center-of-mass.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Nicolas Velez-AngelLaboratory of Sensory Neuroscience, The Rockefeller University, New York, NY, USA.
Sihao LuLaboratory of Sensory Neuroscience, The Rockefeller University, New York, NY, USA.
Brian FabellaLaboratory of Sensory Neuroscience, The Rockefeller University, New York, NY, USA.
Caleb C ReagorLaboratory of Sensory Neuroscience, The Rockefeller University, New York, NY, USA.
Holland R BrownSackler Institute of Developmental Psychobiology, Weill Cornell Medicine, New York, NY, USA.
Yuriria VázquezLaboratory of Sensory Neuroscience, The Rockefeller University, New York, NY, USA.
Adrian JacoboChan Zuckerberg Biohub, San Francisco, CA, USA.
A J HudspethLaboratory of Sensory Neuroscience, The Rockefeller University, New York, NY, USA.

Funding

SCAPE microscopy for high-speed 3D imaging of cellular function in behaving animals: Continued innovation, optimization, and disseminationUF1NS108213 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HILLMAN, ELIZABETH M. C. · 2018 to 2018
$3.5M
SCAPE microscopy for high-speed in-vivo volumetric microscopy in behaving organismsU01NS094296 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HILLMAN, ELIZABETH M. C. · 2015 to 2017
$2.0M
NINDS NIH HHS U01 NS094296NINDS NIH HHS UF1 NS108213
6 · The paper itself

Abstract

An animal's ability to interact with its environment relies on the brain's capacity to distinguish between patterns of sensory information. To investigate this, we used the posterior lateral line system of larval zebrafish, composed of mechanosensory neuromasts innervated by neurons from the posterior lateral line ganglion. Using single-neuromast optogenetic stimulation and whole-brain calcium imaging, we developed a precise and flexible approach to examine sensory processing. Stimulating individual neuromasts revealed that second-order circuits show diverse selectivity despite lacking topographic organization. We further show that complex combinations of neuromast stimulation are encoded by sparse neuronal ensembles within the medial octavolateralis nucleus (MON) and that neuromast input integrates nonlinearly. This approach provides a powerful method for spatiotemporal interrogation of the zebrafish lateral line, sheds light on how neuromast input is integrated in the brain, and positions this system as a valuable model for studying whole-brain sensory encoding.

Indexed as

NeuroscienceSensory neuroscienceZoology

Identifiers

PMID41467186
PMCPMC12744297

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.