Evidence map›Paper›PMID 41465353›Full record

ArticleInternational journal of molecular sciences2025

Nucleotide Substitution Biases in Related Cancer Driver Genes.

Adam Khadre, Yifan Dou, Golrokh C Mirzaei, Ruben C Petreaca

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Adam KhadreDepartment of Computer Science and Engineering, The Ohio State University, Columbus, OH 43210, USA.
Yifan DouDepartment of Computer Science and Engineering, The Ohio State University, Columbus, OH 43210, USA.ORCID 0009-0009-9430-4876
Golrokh C MirzaeiDepartment of Computer Science and Engineering, The Ohio State University, Columbus, OH 43210, USA.
Ruben C PetreacaDepartment of Molecular Genetics, The Ohio State University, Marion, OH 43302, USA.

Funding

TIP60-chromatin remodeling complex roles in chromosome break repairR03CA304032 · NCI · OHIO STATE UNIVERSITY · PI BOULEY, RENEE, PETREACA, RUBEN CIPRIAN · 2025 to 2025
$158k
NCI NIH HHS R03 CA304032NIH HHS 1R03CA304032-01
6 · The paper itself

Abstract

Nucleotide substitutions are common in cancer cells, and they occur in both protein coding regions and non-coding regions (5' and 3' UTRs and introns). Although substitutions in non-coding regions have the potential to alter gene expression, it is the alteration of coding regions that affects protein function and has the most drastic effect on cellular transformation. Mutations in certain genes (e.g.,

Indexed as

MutationNeoplasmsGene Expression Regulation, NeoplasticHumansProto-Oncogene Proteins p21(ras)Proto-Oncogene Proteins p21(ras)cancermutation biasnucleotide substitutionpurifying selection

Identifiers

PMID41465353
PMCPMC12732676

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.