Evidence map›Paper›PMID 41465262›Full record

ArticleInternational journal of molecular sciences2025

Multi-Level Profiling of MAPK-Associated Genes and MicroRNAs Uncovers Regulatory Networks in Breast Cancer Subtypes.

Katarzyna Król-Jatręga, Elżbieta Mitka-Krysiak, Kacper Boroń, Piotr Ossowski, Nikola Zmarzły, Paweł Ordon, Wojciech Kulej, Tomasz Sirek, Agata Sirek, Dariusz Boroń and 3 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Katarzyna Król-JatręgaCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Elżbieta Mitka-KrysiakCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Kacper BorońDepartment of Plastic Surgery, Faculty of Medicine, Academia of Silesia, 40-555 Katowice, Poland.ORCID 0000-0001-8207-5548
Piotr OssowskiCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Nikola ZmarzłyCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.ORCID 0000-0002-7833-6167
Paweł OrdonCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.ORCID 0000-0001-6163-104X
Wojciech KulejCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Tomasz SirekCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Agata SirekCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Dariusz BorońCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.ORCID 0000-0002-2691-5829
Grzegorz WyrobiecDepartment of Histology and Cell Pathology in Zabrze, Faculty of Medical Sciences in Zabrze, Medical University of Silesia in Katowice, 41-808 Zabrze, Poland.
Yuriy PrudnikovCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.
Beniamin Oskar GrabarekCollegium Medicum, WSB University, 41-300 Dabrowa Gornicza, Poland.ORCID 0000-0003-1633-7145

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer (BC) comprises heterogeneous subtypes with distinct molecular drivers and clinical behaviors. Among the key signaling pathways implicated in BC progression is the mitogen-activated protein kinase (MAPK) cascade, which regulates cell proliferation, apoptosis, and stress responses. microRNAs (miRNAs), as post-transcriptional regulators, are increasingly recognized as modulators of MAPK-associated genes, yet their integrated role across BC subtypes remains incompletely understood. This study included 405 patients with histopathologically confirmed BC, stratified into luminal A (LumA), HER2-negative luminal B, HER2-positive luminal B, non-luminal HER2-positive, and triple-negative breast cancer (TNBC). Control tissues were obtained from matched surgical margins. We performed mRNA profiling (Affymetrix microarrays), reverse transcription-quantitative polymerase chain reaction (RT-qPCR), protein quantification (enzyme-linked immunosorbent assay (ELISA), and miRNA expression analysis. Predicted miRNA-mRNA interactions were analyzed using the miRDB database. Functional protein-protein interactions were explored using the STRING database. MAP3K1, MAP2K4, and TP53 were significantly downregulated across all subtypes, while PPM1D, LMTK3, and TGFB1 were upregulated, especially in TNBC. These alterations were supported by concordant changes at the protein level. Dysregulated miRNAs-miR-21-3p, miR-23c, miR-27a-3p, miR-205-3p, and miR-300-exhibited in-verse expression patterns relative to their predicted target genes. STRING analysis identified TP53 as a central hub, linking MAPK signaling with stress and apoptotic pathways. This integrated transcriptomic and miRNA profiling study reveals subtype-specific dysregulation of MAPK-associated genes and their miRNA regulators in BC, with TNBC exhibiting the most profound alterations. These findings provide insight into potential targets for personalized therapeutic strategies.

Indexed as

Breast NeoplasmsGene Expression Regulation, NeoplasticGene Regulatory NetworksMicroRNAsMitogen-Activated Protein KinasesAdultAgedFemaleGene Expression ProfilingHumansMAP Kinase Signaling SystemMiddle AgedRNA, MessengerTriple Negative Breast NeoplasmsMicroRNAsMitogen-Activated Protein KinasesRNA, Messengerbreast neoplasmsgene expression regulationMAP kinase signaling systemMicroRNAs

Identifiers

PMID41465262
PMCPMC12732379

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.