Evidence map›Paper›PMID 41464182›Full record

ArticleDiagnostics (Basel, Switzerland)2025

Toward Graph-Based Decoding of Tumor Evolution: Spatial Inference of Copy Number Variations.

Yujia Zhang, Yitao Yang, Yan Kong, Bingxu Zhong, Kenta Nakai, Hui Lu

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yujia ZhangSJTU-Yale Joint Center for Biostatistics and Data Science, State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic and Developmental Sciences, Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0009-0002-6240-9728
Yitao YangDepartment of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo, Tokyo 113-0033, Japan.ORCID 0009-0000-0370-7405
Yan KongNational Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-7156-9905
Bingxu ZhongSJTU-Yale Joint Center for Biostatistics and Data Science, State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic and Developmental Sciences, Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-9961-2212
Kenta NakaiDepartment of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, University of Tokyo, Tokyo 113-0033, Japan.ORCID 0000-0002-8721-8883
Hui LuSJTU-Yale Joint Center for Biostatistics and Data Science, State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic and Developmental Sciences, Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-8347-0830

Funding

JSPS Grant-in-Aid for JSPS Fellows 25KJ0992Neil Shen's SJTU Medical Research Fund NAthe National Key R&D Program of China 2024YFC3505901 and 2024YFC3505900the Science and Technology Commission of Shanghai Municipality 23JS1400700, 25JS2850100, 25JC3201100the Science and Technology Innovation Key R&D Program of Chongqing CSTB2024TIAD-STX0006
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

copy number variationgraph neural networksmulti-omicsspatial transcriptomicstumor evolutiontumor heterogeneity

Identifiers

PMID41464182
PMCPMC12731904

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.