Evidence map›Paper›PMID 41463393›Full record

ArticleBiomolecules2025

An Integrated Systems Pharmacology Approach Combining Bioinformatics, Untargeted Metabolomics and Molecular Dynamics to Unveil the Anti-Aging Mechanisms of

Min Hyung Cho, Haiyan Jin, JangHo Ha, SungJune Chu, SoHee An

Abstract read
In one paragraph

Article in Biomolecules, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Mapping the Polar Neuro-Interactome ofLife (Basel, Switzerland) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Min Hyung ChoBioinformatics and Molecular Design Research Center (BMDRC), Songdogwahak-ro 85, Yeonsu-gu, Incheon 21983, Republic of Korea.ORCID 0000-0003-3436-9909
Haiyan JinBioinformatics and Molecular Design Research Center (BMDRC), Songdogwahak-ro 85, Yeonsu-gu, Incheon 21983, Republic of Korea.ORCID 0009-0001-8745-3648
JangHo HaBioinformatics and Molecular Design Research Center (BMDRC), Songdogwahak-ro 85, Yeonsu-gu, Incheon 21983, Republic of Korea.
SungJune ChuBioinformatics and Molecular Design Research Center (BMDRC), Songdogwahak-ro 85, Yeonsu-gu, Incheon 21983, Republic of Korea.
SoHee AnBioinformatics and Molecular Design Research Center (BMDRC), Songdogwahak-ro 85, Yeonsu-gu, Incheon 21983, Republic of Korea.ORCID 0009-0005-0172-6633

Funding

Ministry of Food and Drug Safety RS-2025-02263345
6 · The paper itself

Abstract

Skin aging, driven by oxidative stress, UV exposure, inflammation, and extracellular matrix degradation, necessitates the discovery of safer, multi-target natural products. We established an integrated pipeline combining UHPLC-MS/MS metabolomics, computational methods (network pharmacology, molecular docking, and dynamics simulation), and in vitro bioassays to efficiently discover and mechanistically characterize anti-aging compounds from novel botanical sources. We applied this pipeline to identify and evaluate Tephroseris flammea, a previously unassessed plant. Metabolomic profiling identified 21 compounds, including flavonoids, phenylpropanoids, and pyrrolizidine alkaloids. These compounds were linked via network pharmacology to 226 skin-aging-related targets, primarily involving inflammation (via AKT1, RELA) and matrix degradation (via MAPK3). Molecular docking and 100 ns molecular dynamics simulations confirmed stable ligand-target interactions with favorable binding energies. Validating these in silico predictions, the

Indexed as

MetabolomicsPlant ExtractsSkin AgingAntioxidantsComputational BiologyFibroblastsHumansMolecular Docking SimulationMolecular Dynamics SimulationNetwork PharmacologyAntioxidantsPlant Extractsmolecular dynamicsnetwork pharmacologyskin anti-agingTephroseris flammeauntargeted metabolomicsUV-induced photoaging

Identifiers

PMID41463393
PMCPMC12730562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.