Evidence map›Paper›PMID 41461777›Full record

ArticleScientific reports2025

Construction of an early diagnostic model for pulmonary hypertension based on aging-related signature genes and identification of potential therapeutic targets.

Mengze Wang, Jiafei Lu, Xinyu Li, Huating Xie, Junjie Liang, Jun Luo, Xishu Deng, Guoquan Pan, Bowen Ji, Xiaojie Ding

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Mengze Wang *Department of Neurosurgery, Kunming Children's Hospital, Kunming, Yunnan, China.
Jiafei Lu *Laboratory of Anti-inflammatory and Immunomodulatory Pharmacology, Innovation Program of Drug Research on Inflammatory and Immune Diseases, NMPA Key Laboratory for Research and Evaluation of Drug Metabolism & Guangdong Provincial Key Laboratory of New Drug Screening & Guangdong-Hongkong-Macao Joint Laboratory for New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, Guangzhou, 510515, China.
Xinyu LiDepartment of Pediatric Intensive Care Unit, The Second Affiliated Hospital, Yuying Children's Hospital of Wenzhou Medical University, 109 Xueyuan Road, Lucheng District, Wenzhou, 325027, Zhejiang, China.
Huating XieDepartment of Pediatric Intensive Care Unit, The Second Affiliated Hospital, Yuying Children's Hospital of Wenzhou Medical University, 109 Xueyuan Road, Lucheng District, Wenzhou, 325027, Zhejiang, China.
Junjie LiangDepartment of Pediatric Intensive Care Unit, The Second Affiliated Hospital, Yuying Children's Hospital of Wenzhou Medical University, 109 Xueyuan Road, Lucheng District, Wenzhou, 325027, Zhejiang, China.
Jun LuoDepartment of Pharmacy, Taizhou Central Hospital (Taizhou University Hospital), Taizhou, 318000, Zhejiang, PR China.
Xishu DengDepartment of Pediatric Intensive Care Unit, Kunming Children's Hospital, Kunming, Yunnan, China.
Guoquan PanDepartment of Pediatric Intensive Care Unit, The Second Affiliated Hospital, Yuying Children's Hospital of Wenzhou Medical University, 109 Xueyuan Road, Lucheng District, Wenzhou, 325027, Zhejiang, China. 81801800@163.com.
Bowen JiDepartment of Anesthesiology, The Second Hospital of Jiaxing, The Second Affiliated Hospital of Jiaxing University, Jiaxing City, People's Republic of China. bowenji000@163.com.
Xiaojie DingDepartment of Geriatrics, Zhejiang Rongjun Hospital, No. 589, West Zhonghuan Road, Nanhu District Jiaxing, Jiaxing, 314000, Zhejiang, China. fifty379169439@qq.com.

Funding

Science and Technology Bureau Project of Taizhou Nos. 23ywa52Zhejiang Provincial Medical and Health Science and Technology Project Nos. 2024KY540
6 · The paper itself

Abstract

Pulmonary hypertension (PH) is a progressive cardiopulmonary disorder. It features elevated pulmonary arterial pressure, which leads to right ventricular failure and increased mortality. PH's insidious nature, with no specific clinical symptoms, hinders early diagnosis. Recent investigations have implicated vascular cell senescence in the pathogenesis of PH; however, the identification of early diagnostic biomarkers and the development of senescence-targeted therapeutics remain areas of unmet need.In this study, an integrative transcriptomic analysis of multiple datasets was undertaken to delineate differentially expressed senescence-related genes (DESRGs). Feature genes were selected via the implementation of LASSO regression, random forest, and support vector machine algorithms. Subsequently, a diagnostic nomogram was constructed, predicated on six hub genes. The discriminative capacity of the nomogram was rigorously validated utilizing external datasets. Single-gene gene set enrichment analysis (GSEA) was executed to elucidate potential biological functions. The expression profiles of core genes were corroborated through single-cell RNA sequencing and qPCR in an in vitro hypoxia model of pulmonary artery smooth muscle cells. Finally, connectivity map (cMAP) analysis and molecular docking were employed to identify potential therapeutic small molecules.The analysis identified 20 DESRGs. Six feature genes (LCN2, CBS, ABCB1, NQO1, TWIST1, TLR8) were consistently selected by all three machine learning methods. The diagnostic nomogram exhibited an area under the curve (AUC) of 0.974 in the training cohort and demonstrated robust performance in independent validation cohorts. Notably, CBS, TLR8, and NQO1 were significantly downregulated in validation datasets, single-cell sequencing, and the in vitro hypoxia model. GSEA revealed significant enrichment of innate immune responses, the IL-17 pathway, and oxidative stress. cMAP analysis identified TUL-XXI039 as a potential therapeutic compound, with molecular docking studies predicting strong binding affinities (binding energies < -8.0 kcal/mol) to CBS, TLR8, and NQO1.This study introduces a novel, high-precision diagnostic model for PH based on senescence-related genes, underscoring CBS, TLR8, and NQO1 as promising biomarker candidates. TUL-XXI039 emerges as a potential multi-target therapeutic candidate for PH, thus meriting further investigation.

Indexed as

AgingHypertension, PulmonaryTranscriptomeBiomarkersCellular SenescenceEarly DiagnosisGene Expression ProfilingHumansMolecular Docking SimulationMyocytes, Smooth MuscleBiomarkersAgingDiagnostic modelMachine learningPulmonary hypertension

Identifiers

PMID41461777
PMCPMC12749332

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.