Evidence map›Paper›PMID 41460312›Full record

ArticleCurrent microbiology2025

Psychromicrobium ferritrahens sp. nov., A Novel Actinobacterium Isolated from Decayed Wood in Shizong County, China.

Lin-Bo Zhang, Jiang-Yuan Zhao, Yong-Jie Zeng, Hong-Bo Zha, Lin Gong, Pei-Wen Yang, Zhang-Gui Ding, Ming-Gang Li, Shun-Bo Gao, Le-Le Li and 1 more

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Article in Current microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Lin-Bo Zhang *Yunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China.
Jiang-Yuan Zhao *Yunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China.
Yong-Jie ZengYunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China.
Hong-Bo ZhaZhaotong Tobacco Company of Yunnan Province, Zhaotong, 657000, People's Republic of China.
Lin GongZhaotong Tobacco Company of Yunnan Province, Zhaotong, 657000, People's Republic of China.
Pei-Wen YangInstitute of Agricultural Environmental Resources, Yunnan Academy of Agricultural Sciences, Kunming, 650205, People's Republic of China.
Zhang-Gui DingYunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China.
Ming-Gang LiYunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China.
Shun-Bo GaoZhaotong Tobacco Company of Yunnan Province, Zhaotong, 657000, People's Republic of China. ztldgsb@126.com.
Le-Le LiYunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China. lelel525@163.com.ORCID http://orcid.org/0000-0002-4091-3870
Shu-Kun TangYunnan Institute of Microbiology, Key Laboratory for Southwest Microbial Diversity of the Ministry of Education, School of Life Sciences, Yunnan University, Kunming, 650091, People's Republic of China. tangshukun@ynu.edu.cn.

Funding

Major Science and Technology Projects in Yunnan Province 202002AA100007Major Science and Technology Projects in Yunnan Province 202202AE090010Major Science and Technology Projects in Yunnan Province 202202AE090015The Yunnan Tobacco Corporation's 2024 Major Science and Technology Project 2024530000241013
6 · The paper itself

Abstract

A Gram-stain-positive actinobacterium strain YIM B11713T with siderophore-producing activity was isolated from Shizong County, Qujing City, Yunnan Province, China. The cells were short rod-shaped, and the colonies were milky white. Strain YIM B11713T exhibited growth at 10–40 °C (optimum, 35 °C) and pH 5.0–8.0 (optimum, pH 6.0), tolerating up to 6% (w/v) NaCl. Comparison of the 16S rRNA gene sequence showed 98.4% similarity with Psychromicrobium lacuslunae IHBB 11,108T. Phylogenomic analyses further confirmed that strain YIM B11713T was affiliated with the genus Psychromicrobium. Strain YIM B11713T shared 76.2% average nucleotide identity and 20.0% digital DNA-DNA hybridization with P. lacuslunae IHBB 11,108T. Chemotaxonomic analysis of strain YIM B11713T showed that the major fatty acids were anteiso-C17:0, anteiso-C15:0, and iso-C15:0, the predominant menaquinone was MK-9 (H2), and the polar lipids included phosphatidylglycerol, dimannosylglyceride, monogalactosyldiacylglycerol, diphosphatidylglycerol, an unidentified glycolipid, and uncharacterized phospholipids. Genomic analysis identified siderophore gene clusters, crucial for plant growth promotion and soil bioremediation. Based on its distinct genotypic and phenotypic traits, strain YIM B11713T (= CGMCC 1.62142T = NBRC 116605T) represents a novel Psychromicrobium species, for which the name Psychromicrobium ferritrahens sp. nov. is proposed.

Indexed as

ActinobacteriaWoodBacterial Typing TechniquesBase CompositionChinaDNA, BacterialFatty AcidsNucleic Acid HybridizationPhospholipidsPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNADNA, BacterialFatty AcidsPhospholipidsRNA, Ribosomal, 16S

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.