Evidence map›Paper›PMID 41457149›Full record

ArticleMolecular neurobiology2025

The Peripheral Epigenome Predicts White Matter Volume Contingent on Developmental Stage: An ECHO Study.

Taena Hanson, Sophie Spencer, Samantha A Harker, Fatoumata Barry, Jennifer Beauchemin, B Blair Braden, Phoebe Burton, Viren D'sa, Daphne Koinis-Mitchell, Sarah E Mennenga and 3 more

Abstract read
In one paragraph

Article in Molecular neurobiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Taena HansonSchool of Life Sciences and Psychology, Arizona State University, Tempe, AZ, 85287, USA.
Sophie SpencerSchool of Life Sciences and Psychology, Arizona State University, Tempe, AZ, 85287, USA.
Samantha A HarkerSchool of Life Sciences and Psychology, Arizona State University, Tempe, AZ, 85287, USA.
Fatoumata BarryAlpert Medical School, Rhode Island Hospital, Brown University, Warren Providence, RI, 02903, USA.
Jennifer BeaucheminAlpert Medical School, Rhode Island Hospital, Brown University, Warren Providence, RI, 02903, USA.
B Blair BradenCollege of Health Solutions, Arizona State University, Phoenix, AZ, 85004, USA.
Phoebe BurtonAlpert Medical School, Rhode Island Hospital, Brown University, Warren Providence, RI, 02903, USA.
Viren D'saAlpert Medical School, Rhode Island Hospital, Brown University, Warren Providence, RI, 02903, USA.
Daphne Koinis-MitchellAlpert Medical School, Rhode Island Hospital, Brown University, Warren Providence, RI, 02903, USA.
Sarah E MennengaSchool of Life Sciences and Psychology, Arizona State University, Tempe, AZ, 85287, USA.
Sean C L DeoniMelinda Gates Foundation, Seattle, WA, 98109, USA.
Candace R LewisSchool of Life Sciences and Psychology, Arizona State University, Tempe, AZ, 85287, USA. candace.lewis@asu.edu.
on behalf of program collaborators for Environmental influences on Child Health Outcomes

Funding

Project-005U2COD023375 · OD · DUKE UNIVERSITY · PI JUNFENG ZHANG · 2016 to 2026
$215.9M
ECHODAC (Environmental Influences on Child Health Outcomes Data Analysis Center)U24OD023382 · OD · JOHNS HOPKINS UNIVERSITY · PI Diane J Catellier, LISA P JACOBSON · 2016 to 2026
$148.4M
The ECHO Measurement Core: A Framework and Resource for Assessing Environmental Exposure and Child HealthU24OD023319 · OD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Courtney K Blackwell, RICHARD GERSHON · 2016 to 2026
$43.7M
Host DNA methylation as a mechanism of microbiome influence on internalizing behaviorR00HD099307 · NICHD · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI LEWIS, CANDACE RENEE · 2022 to 2024
$703k
Environmental influences on Child Health Outcomes (ECHO) Program, Office of the Director, National Institutes of Health U2COD023375; U24OD023382; U24OD023319; 5U2COD023375-06National Institute of Child Health and Human Development R00HD099307NICHD NIH HHS R00 HD099307NIH HHS U24 OD023319NIH HHS U24 OD023382NIH HHS U2C OD023375
6 · The paper itself

Abstract

White matter (WM) development is crucial for efficient neural connectivity, and disruptions in its maturation are associated with neurocognitive and psychiatric disorders. Emerging evidence suggests that epigenetic mechanisms, particularly DNA methylation (DNAm), regulate WM structure, yet little is known about these relationships in pediatric populations. Using data from the Environmental Influences on Child Health Outcomes (ECHO) study, we investigated the association between peripheral DNAm of WM-related genes and WM volume (WMV) across development. Salivary DNAm profiles were obtained from 205 children (2 months-15.5 years) using the Infinium MethylationEPIC array, and T1-weighted MRI was used to quantify WMV. A targeted-epigenome analysis identified 1867 CpG sites across 352 genes significantly predicting WMV (FDR q < 0.05). Notably, 11,611 CpG sites exhibited age-dependent associations, with effects strongest in early childhood. Further, DNAm in saliva significantly correlated with DNAm in brain tissue (r = 0.915). These findings suggest that peripheral epigenetic markers may serve as biomarkers of neurodevelopmental trajectories, with potential applications in early detection of WM-related disorders. Our study highlights the importance of developmental timing in DNAm-WMV associations and underscores the utility of saliva-based DNAm in pediatric neuroimaging research.

Indexed as

Epigenesis, GeneticEpigenomeWhite MatterAdolescentBrainChildChild, PreschoolCpG IslandsDNA MethylationFemaleHumansInfantMagnetic Resonance ImagingMaleOrgan SizeSalivaDevelopmentDNA methylationEpigeneticsNeuroimagingWhite matter

Identifiers

PMID41457149
PMCPMC12745313

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.