Evidence map›Paper›PMID 41455989›Full record

ArticleVirology journal2025

Virome analysis of mango reveals mangifera indica latent virus, a benyvirus and a novel olivavirus.

Malyaj R Prajapati, Mailem Yazing Shimray, Jayesh Gehlot, Abhinav Tiwari, Deepak Singh, Nitika Gupta, Virendra K Baranwal, Susheel Kumar Sharma

Abstract read
In one paragraph

Article in Virology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Malyaj R Prajapati *Advanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Mailem Yazing Shimray *Advanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Jayesh Gehlot *Advanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Abhinav TiwariAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Deepak SinghICAR-Central Institute for Subtropical Horticulture, Rehmankhera, Uttar Pradesh, 226101, India.
Nitika GuptaAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. nitika.iari@gmail.com.
Virendra K BaranwalAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. vbaranwal2001@yahoo.com.
Susheel Kumar SharmaAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. susheelsharma19@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mango (Mangifera indica), a globally significant fruit crop, is susceptible to diverse pathogens that threaten its productivity. High-throughput sequencing-based virome profiling and Sanger sequencing of symptomatic (mosaic, upward leaf curling with undulated margin in the young leaves) mango samples revealed the presence of a novel olivavirus (mangifera virus 1, MaV-1), and a benyvirus (mangifera indica latent virus, MiLV). Comparative genomic and phylogenetic analyses confirmed the taxonomic placement of MaV-1 within the proposed genus Olivavirus, based on conserved domains and sequence divergence in the RdRp, HSP70h, and coat protein genes. This study represents the first report of MiLV in India and a novel MaV-1 species infecting mango worldwide. Current study enhances understanding of mango viral spectrum and highlights the need for viral surveillance to address the potential threats to mango cultivation.

Indexed as

MangiferaPlant DiseasesPlant VirusesRNA VirusesViromeGenome, ViralHigh-Throughput Nucleotide SequencingIndiaPhylogenyRNA, ViralRNA, ViralBenyvirusHTSMangoMango diseasesOlivavirusPhylogenetic analysisPlant virologyVirome

Identifiers

PMID41455989
PMCPMC12918645

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.