Evidence map›Paper›PMID 41454757›Full record

ArticleProtein science : a publication of the Protein Society2026

Role of N-glycosylation as a determinant of ATG9A conformations and activity.

Mattia Utichi, Matteo Lambrughi, Henri-Baptiste Marjault, Christian B Borg, Sergio Esteban Echeverría, Kenji Maeda, Nicholas M I Taylor, Anders Gorm Pedersen, Elisa Fadda, Marja Jäättelä and 1 more

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Role of N-glycosylation as a determinant of ATG9A conformations and activity.Protein science : a publication of the Protein Society · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mattia UtichiCancer Structural Biology, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.
Matteo LambrughiCancer Structural Biology, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.
Henri-Baptiste MarjaultCancer Structural Biology, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.
Christian B BorgCancer Structural Biology, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.
Sergio Esteban EcheverríaCancer Systems Biology, Section for Bioinformatics, Department of Health and Technology, Technical University of Denmark, Lyngby, Denmark.
Kenji MaedaCell Death and Metabolism, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.
Nicholas M I TaylorStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, ICMM, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID https://orcid.org/0000-0003-0761-4921
Anders Gorm PedersenSection for Bioinformatics, Department of Health and Technology, Technical University of Denmark, Lyngby, Denmark.
Elisa FaddaSchool of Biological Sciences, University of Southampton, Southampton, UK.
Marja JäätteläCell Death and Metabolism, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.
Elena PapaleoCancer Structural Biology, Center for Autophagy, Recycling and Disease, Danish Cancer Institute, Copenhagen, Denmark.

Funding

Danmarks Frie Forskningsfond 102517Danmarks Grundforskningsfond DNRF125DECI-PRACE 17thEuroHPC EHPC-BEN-2023B02-010EuroHPC EHPC-REG-2023R01-051NovoNordisk Fonden NNF14CC0001NovoNordisk Fonden NNF20OC0065262NovoNordisk Fonden NNF23OC0081528
6 · The paper itself

Abstract

Here, we investigate the effects of glycosylation at position N99 on the structural dynamics and lipid scrambling activity of ATG9A, a key autophagy protein, using microsecond all-atom molecular dynamics simulations. ATG9A is an integral membrane protein involved in autophagosome biogenesis, and glycosylation at N99 has previously been implicated in intracellular trafficking, although its precise role remains unclear. The simulations reveal that the hydrophilic central cavity of ATG9A supports lipid reorientation and partial trans-bilayer movements, consistent with experiments on its lipid scrambling activity. We propose that N-glycosylation at N99 enhances cooperative interactions between protomers, facilitating lipid insertion and translocation within the central cavity. These findings suggest a mechanism by which glycosylation may influence lipid redistribution across the phagophore membrane during autophagy. To test this hypothesis, we generate N99 variants (ATG9A

Indexed as

Autophagy-Related ProteinsMembrane ProteinsVesicular Transport ProteinsAutophagyGlycosylationHumansMolecular Dynamics SimulationProtein ConformationATG9A protein, humanAutophagy-Related ProteinsMembrane ProteinsVesicular Transport ProteinsATG9Aautophagyglycosylationmembranesmolecular dynamicspost‐translational modifications

Identifiers

PMID41454757
PMCPMC12743292

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.