Evidence map›Paper›PMID 41451370›Full record

ArticleFrontiers in pharmacology2025

Optimisation of peptides targeting reverse transcriptase HIV-1 using QSAR, machine learning, and computational approaches.

Fachrur Rizal Mahendra, Indira Prakoso, Alfa Marzelino, Muhamad Rizqy Fadhillah, Syukriyansyah, Muhammad Marsha Azzami Hasibuan, Juniza Firdha Suparningtyas, Mikael Kristiadi, Aprijal Ghiyas Setiawan, Faris Izzatur Rahman and 5 more

Abstract read
In one paragraph

Article in Frontiers in pharmacology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Anti-HIV Potential ofViruses · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Fachrur Rizal Mahendra *Bioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
Indira Prakoso *Bioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
Alfa MarzelinoBioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
Muhamad Rizqy FadhillahBioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
SyukriyansyahDepartment of Information Systems, Faculty of Technology and Computer Science, Indraprasta PGRI University, Jakarta, Indonesia.
Muhammad Marsha Azzami HasibuanDepartment of Biochemistry, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Bogor, West Java, Indonesia.
Juniza Firdha SuparningtyasBioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
Mikael KristiadiBioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
Aprijal Ghiyas SetiawanBiochemistry and Biomolecular Engineering Research Division, Faculty of Mathematics and Natural Sciences, Institut Teknologi Bandung, Bandung, West Java, Indonesia.
Faris Izzatur RahmanBioinformatics Research Center, Indonesian Institute of Bioinformatics (INBIO Indonesia), Malang, East Java, Indonesia.
Anissa Nofita SariResearch Center for Vaccine and Drug, National Research and Innovation Agency (BRIN), Bogor, West Java, Indonesia.
Nauval Rajwaa RaysendriaFaculty of Biology, Universitas Gadjah Mada. Jl. Teknika Selatan, Yogyakarta, Indonesia.
Ilham KurniawanFaculty of Medicine, Universitas Pembangunan Nasional Veteran Jawa Timur, Surabaya, Indonesia.
Wawaimuli ArozalDepartment of Information Systems, Faculty of Technology and Computer Science, Indraprasta PGRI University, Jakarta, Indonesia.
Kusmardi KusmardiAnatomical Pathology, Faculty of Medicine, Universitas Indonesia, Depok, West Java, Indonesia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence of drug resistance and adverse side effects associated with current HIV-1 reverse transcriptase (RT) inhibitors underscores the need for novel therapeutic strategies. Peptide-based drugs offer high specificity and lower toxicity, but their development is challenged by the vast combinatorial space of possible sequences and formulation issues. This study aims to identify potent tripeptide-based inhibitors targeting HIV-1 RT through an integrated computational pipeline combining machine learning, QSAR modeling, and

Indexed as

drug discoveryHIVmachine learningpeptideQSARquantum mechanicsreverse transcriptase

Identifiers

PMID41451370
PMCPMC12727953

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.