Evidence map›Paper›PMID 41451118›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2025

Improving U-Net Segmentation of Cutaneous Chronic Graft-Versus-Host Disease in Clinical Photographs with Semi-Supervised Training.

Andrew J McNeil, Kelsey Parks, Michael Pogharian, Edward W Cowen, Julia Lehman, Stephanie J Lee, Aaron Zhao, Steven Z Pavletic, Inga Saknite, Joseph Coco and 3 more

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Andrew J McNeilVanderbilt University, Nashville, TN.
Kelsey ParksDepartment of Veterans Affairs, Nashville, TN.
Michael PogharianVanderbilt University Medical Center, Nashville, TN.
Edward W CowenDermatology Branch, NIAMS, Bethesda, MD.
Julia LehmanMayo Clinic, Rochester, MN.
Stephanie J LeeFred Hutchinson Cancer Center, Seattle, WA.
Aaron ZhaoCenter for Cancer Research, National Cancer Institute, MD.
Steven Z PavleticCenter for Cancer Research, National Cancer Institute, MD.
Inga SakniteVanderbilt University Medical Center, Nashville, TN.
Joseph CocoVanderbilt University Medical Center, Nashville, TN.
Daniel FabbriVanderbilt University Medical Center, Nashville, TN.
Eric R TkaczykVanderbilt University, Nashville, TN.
Benoit M DawantVanderbilt University, Nashville, TN.

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
NRSA Training CoreTL1TR002244 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Julie A. Bastarache · 2017 to 2026
$4.6M
Artificial intelligence to estimate extent of cGVHD from patient photosR01HL169944 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Eric R Tkaczyk · 2024 to 2026
$2.3M
CSRD VA IK2 CX001785NCATS NIH HHS TL1 TR002244NCATS NIH HHS UL1 TR002243NHLBI NIH HHS R01 HL169944
6 · The paper itself

Abstract

Measuring skin involvement in chronic graft-versus-host disease (cGVHD) currently requires expert manual assessment, which is costly, time-consuming, and shows high interrater disagreement (>20% surface area). In our previous work, automated image analysis showed promise for measuring affected skin area under controlled photography conditions. Our aim is to improve the performance of these methods in standard clinical photographs without the need for costly expert annotations using a semi-supervised approach. A baseline U-Net model was trained in a fully supervised manner using 360 3D photographs from 36 cGVHD patients, with expert-marked ground truth contours of affected skin. The model was then iteratively retrained by incorporating an additional 5648 unlabeled photographs from 83 new patients using a semi-supervised method. Testing on clinical photographs of 20 held-out patients, the median surface area error improved from 19.2% (interquartile range 6.3 - 33.8) at baseline to 10.2% (4.5 - 22.6) after retraining. Semi-supervised training therefore provides an effective method for translating a pre-trained U-Net segmentation model to standard clinical photographs, without the need for additional expert annotations. Such models could help standardize cGVHD assessment and tracking, alleviating the need for costly expert evaluations and providing a reliable tool that would significantly enhance the current standard of manual assessment.

Indexed as

cGVHDGraft-versus-host diseasesegmentationsemi-supervisedskinU-Net

Identifiers

PMID41451118
PMCPMC12734756

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.