Evidence map›Paper›PMID 41449396›Full record

ArticleMicrobial cell factories2025

Enhanced anti-EpCAM ScFv production and reduced acetate overflow in a BW25113-derived E. coli strain with ArcA and Pka deletions.

Majid Basafa, Aidin Behravan, Hossein Vahidi, Atieh Hashemi

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Article in Microbial cell factories, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Majid Basafa *Department of Pharmaceutical Biotechnology, School of Pharmacy, Shahid Beheshti University of Medical Sciences, ValiAsr Avenue, Niayesh Junction, 14155--6153, Tehran, Iran.
Aidin Behravan *Department of Pharmaceutical Biotechnology, School of Pharmacy, Shahid Beheshti University of Medical Sciences, ValiAsr Avenue, Niayesh Junction, 14155--6153, Tehran, Iran.
Hossein VahidiDepartment of Pharmaceutical Biotechnology, School of Pharmacy, Shahid Beheshti University of Medical Sciences, ValiAsr Avenue, Niayesh Junction, 14155--6153, Tehran, Iran.
Atieh HashemiDepartment of Pharmaceutical Biotechnology, School of Pharmacy, Shahid Beheshti University of Medical Sciences, ValiAsr Avenue, Niayesh Junction, 14155--6153, Tehran, Iran. At_hashemi@sbmu.ac.ir.ORCID http://orcid.org/0000-0001-7121-5306

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli strains are widely utilized as cell factories for recombinant protein production. However, acetate overflow remains a significant challenge that negatively impacts both biomass yield and protein expression. Here, we evaluated a previously engineered E. coli K 12 BW25113 strain with pka and arcA deletions (RV04) for the expression of a single-chain variable fragments (scFv) derived from 4D5MOC-B, a monoclonal antibody that binds to epithelial cell adhesion molecule (EpCAM) as a biologically important marker for tumor immunotherapy. According to our results, RV04 strain demonstrated a significant growth advantage over both BW25113 and BL21 strains. In minimal M9 medium, RV04 exhibited a maximum cell density that was 44% higher than wild‑type and 11% higher than BL21. In enriched M9 medium, RV04 achieved a remarkable maximum specific growth rate (µ_max) of 0.775 ± 0.003 h⁻¹ and a maximum cell density of 2.1095 ± 0.0205, even under metabolic load. Regarding acetate accumulation, RV04 fully eliminated acetate accumulation within 24 h, whereas BW25113 accumulated acetate up to 0.521 g L

Indexed as

AcetatesBacterial Outer Membrane ProteinsEpithelial Cell Adhesion MoleculeEscherichia coliEscherichia coli K12Escherichia coli ProteinsSingle-Chain AntibodiesGene DeletionRecombinant ProteinsAcetatesBacterial Outer Membrane ProteinsEpithelial Cell Adhesion MoleculeEscherichia coli ProteinsRecombinant ProteinsSingle-Chain AntibodiesAcetate overflowAnti-EpCAM ScFvArcABioprocess optimizationEscherichia coliGlucose metabolismMetabolic engineeringPkaRecombinant protein production

Identifiers

PMID41449396
PMCPMC12849093

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.