Evidence map›Paper›PMID 41444679›Full record

ArticleHuman genomics2025

Unraveling diethyl phthalate-induced prostate carcinogenesis: core targets revealed by integrated network toxicology, machine learning, and structural validation.

Hao Liu, Junyi Jiang, Ying Tan, Mengying Yang, Hongmei Yang, Canyong Li

Abstract read
In one paragraph

Article in Human genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Hao Liu *Department of Urology, Zhongshan City People's Hospital, Zhongshan, Guangdong Province, China.
Junyi Jiang *Department of Laboratory, Zhongshan Women and Children's Hospital, Zhongshan, Guangdong Province, China.
Ying TanDepartment of Nephrology, Zhongshan City People's Hospital, Zhongshan, Guangdong Province, China.
Mengying YangDepartment of Nephrology, Zhongshan City People's Hospital, Zhongshan, Guangdong Province, China.
Hongmei YangDepartment of Nephrology, Zhongshan City People's Hospital, Zhongshan, Guangdong Province, China.
Canyong LiDepartment of Urology, Zhongshan City People's Hospital, Zhongshan, Guangdong Province, China. lcy15976043260@sina.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeDiethyl phthalate (DEP), a widely distributed environmental contaminant, is epidemiologically linked to prostate cancer (PCa). However, its molecular mechanisms beyond endocrine disruption remain poorly defined. We aimed to investigate the core mechanisms potentially underlying DEP-associated prostate carcinogenesis within a genome-exposome interaction framework.

methodsWe employed an integrated, multi-level framework combining: (1) Integrated chemical structure-based target prediction; (2) Cross-dataset meta-analysis of PCa transcriptomics (7 GEO datasets) for Differentially Expressed Gene (DEG) identification and Weighted Gene Co-expression Network Analysis (WGCNA); (3) Ensemble machine learning (113 models incorporating RF, XGBoost) for core target screening, augmented by SHAP interpretable to predict potential DEP targets.e AI; and (4) Molecular docking validation (AutoDock Vina, binding free energy assessment).

resultsIntegration pinpointed 9 key DEP-PCa targets. Functional enrichment implicated calcium signaling dysregulation, neuroendocrine pathway disruption, and smooth muscle dysfunction as central mechanisms. Machine learning distilled five core regulators: TRPM8, CTSB, CA14, GSTM2, and MYLK. SHAP analysis quantified TRPM8 and CA14 as dominant predictors and revealed critical non-linear interactions: synergistic TRPM8-MYLK co-expression and a CTSB expression threshold effect. Computational validation predicted high-affinity binding of DEP to all five core targets, suggesting potential direct interactions.

conclusionOur integrated analysis suggests that DEP may promote prostate carcinogenesis via a multidimensional network centered on calcium signaling perturbation, neuroendocrine dysregulation, and tumor microenvironment acidification, potentially illustrating a genome-exposome interaction mechanism beyond endocrine disruption. We propose that our analytical framework could serve as a reproducible approach for translational exposomics.

Indexed as

CarcinogenesisMachine LearningPhthalic AcidsProstatic NeoplasmsGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMaleMolecular Docking Simulationdiethyl phthalatePhthalic AcidsDiethyl phthalateMachine learning algorithmMolecular dockingNetwork toxicologyProstate cancer

Identifiers

PMID41444679
PMCPMC12729194

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.