Evidence map›Paper›PMID 41436469›Full record

ArticleNature communications2025

4EHP and NELF-E regulate physiological ATF4 induction and proteostasis in disease models of Drosophila.

Kristoffer Walsh, Hidetaka Katow, Hannah Junn, Deepika Vasudevan, Christoph Dieterich, Hyung Don Ryoo

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kristoffer WalshDepartment of Cell Biology, NYU Grossman School of Medicine, New York, USA.
Hidetaka KatowDepartment of Cell Biology, NYU Grossman School of Medicine, New York, USA.ORCID http://orcid.org/0009-0005-0449-230X
Hannah JunnDepartment of Cell Biology, NYU Grossman School of Medicine, New York, USA.
Deepika VasudevanDepartment of Cell Biology, NYU Grossman School of Medicine, New York, USA.ORCID http://orcid.org/0000-0003-1930-3549
Christoph DieterichDepartment of Internal Medicine III, University Hospital Heidelberg, Heidelberg, Germany.ORCID http://orcid.org/0000-0001-9468-6311
Hyung Don RyooDepartment of Cell Biology, NYU Grossman School of Medicine, New York, USA. hyungdon.ryoo@nyulangone.org.ORCID http://orcid.org/0000-0002-1046-535X

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
Unfolded Protein Response in Eye Development and DiseaseR01EY020866 · NEI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HYUNG D RYOO · 2010 to 2026
$6.9M
Training Program in Cell BiologyT32GM136542 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SMITH, SUSAN · 2020 to 2024
$3.0M
Translational control of stress response signaling - Equipment SupplementR35GM148357 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HYUNG D RYOO · 2023 to 2026
$1.7M
Cell-Type Specific Vulnerability to Tauopathy and Its Prevention in Multiple ModelsR01NS120488 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI RYOO, HYUNG D, SIGURDSSON, EINAR M · 2024 to 2025
$1.6M
NCI NIH HHS P30 CA016087NEI NIH HHS R01 EY020866NIGMS NIH HHS R35 GM148357NIGMS NIH HHS T32 GM136542NINDS NIH HHS R01 NS120488U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) R01EY020866U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM148357U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM136542U.S. Department of Health & Human Services | NIH | NCI | Division of Cancer Epidemiology and Genetics, National Cancer Institute (National Cancer Institute Division of Cancer Epidemiology and Genetics) P30CA016087
6 · The paper itself

Abstract

Cells adapt to proteostatic and metabolic stresses, in part, through stress activated eIF2α kinases that stimulate the translation of ATF4. Stress-induced ATF4 translation is regulated through elements at ATF4 mRNA's 5' leader. In addition to eIF2α kinases, ATF4 induction requires other regulators that remain poorly understood. Here, we report an ATF4 regulatory network consisting of eIF4E-Homologous Protein (4EHP), NELF-E, the 40S ribosome, and eIF3 subunits. Specifically, we found that the mRNA cap-binding protein, 4EHP, was required for ATF4 signaling in the Drosophila larval fat body and in disease models associated with abnormal ATF4 signaling. NELF-E mRNA, encoding a regulator of pol II-mediated transcription, was identified as a top interactor of 4EHP in a TRIBE (Targets of RNA Binding through Editing) screen. Quantitative proteomics analysis revealed that the knockdown of NELF-E or 4EHP commonly reduced several subunits of the 40S ribosome (RpS) and the eIF3 translation initiation factor. Moreover, reduction of NELF-E, 4EHP, RpS12, eIF3l, or eIF3h suppressed the expression of ATF4 and its target genes. These results uncover a previously unrecognized ATF4 regulatory network consisting of 4EHP and NELF-E that impacts proteostasis during normal development and in disease models.

Indexed as

Activating Transcription Factor 4Drosophila ProteinsEukaryotic Initiation Factor-4EProteostasisAnimalsDisease Models, AnimalDrosophila melanogasterEukaryotic Initiation Factor-3Fat BodyLarvaRNA, MessengerSignal TransductionActivating Transcription Factor 4Drosophila ProteinsEukaryotic Initiation Factor-3Eukaryotic Initiation Factor-4ERNA, Messenger

Identifiers

PMID41436469
PMCPMC12816580

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.