Evidence map›Paper›PMID 41436418›Full record

ArticleJournal of cutaneous pathology2026

The Impact of Next-Generation Sequencing on Interobserver Agreement and Diagnostic Accuracy of Deep Penetrating Melanocytic Neoplasms.

Julia Edwin Jeyakumar, Afua Konadu Addo, Haya Mary Beydoun, Shantel Olivares, Armita Bahrami, Thiagarajah Balamurugan, Raymond L Barnhill, Willeke A M Blokx, Klaus J Busam, Lorenzo Cerroni and 28 more

Abstract read
In one paragraph

Article in Journal of cutaneous pathology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Julia Edwin JeyakumarDepartment of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Afua Konadu AddoDepartment of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Haya Mary BeydounDepartment of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Shantel OlivaresDepartment of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.
Armita BahramiDepartment of Pathology, Emory University School of Medicine, Atlanta, Georgia, USA.ORCID https://orcid.org/0000-0002-8515-2649
Thiagarajah BalamuruganDepartment of Pathology, Royal Surrey NHS Foundation Trust, Guildford, UK.
Raymond L BarnhillDepartment of Translational Research, Institut Curie, Paris Sciences and Lettres Research University, and UFR of Medicine, University of Paris Cité, Paris, France.ORCID https://orcid.org/0000-0001-8086-8544
Willeke A M BlokxDepartment of Pathology, Division Laboratories, Pharmacy and Biomedical Genetics University Medical Center Utrecht, Utrecht, the Netherlands.
Klaus J BusamDepartment of Pathology, Dermatopathology Service, Memorial Sloan Kettering Cancer Center, New York City, New York, USA.ORCID https://orcid.org/0000-0003-0888-9601
Lorenzo CerroniDepartment of Dermatology, Medical University of Graz, Graz, Austria.
Martin CookDepartment of Pathology, Royal Surrey NHS Foundation Trust, Guildford, UK.
Arnaud de La FouchardièreDepartment of Biopathology, Centre Leon Bernard, Lyon, France.
Lyn M DuncanDermatopathology Unit, Pathology Service, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, USA.
David E ElderDepartment of Pathology and Laboratory Medicine, Division of Anatomic Pathology, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Peter FergusonMelanoma Institute Australia, The University of Sydney, Sydney, Australia.
Gerardo FerraraAnatomic Pathology and Cytopathology Unit, Istituto Nazionale Tumori IRCCS Fondazione 'G. Pascale', Naples, Italy.ORCID https://orcid.org/0000-0003-0727-4015
Iva JohanssonDepartment of Pathology, Institute of Biomedicine, Sahlgrenska University Hospital, Gothenburg, Sweden.
Jennifer S KoDepartment of Anatomic Pathology, Cleveland Clinic, Cleveland, Ohio, USA.ORCID https://orcid.org/0000-0003-0629-775X
Ji Eun KwonDepartment of Pathology, Ajou University School of Medicine, Suwon, South Korea.
Gilles LandmanDepartment of Pathology, Escola Paulista de Medicina, Universidade Federal de São Paulo, São Paulo, Brazil.
Cecilia LezcanoDepartment of Pathology, Dermatopathology Service, Memorial Sloan Kettering Cancer Center, New York City, New York, USA.
Lori LoweDepartments of Dermatology and Pathology, University of Michigan Medical School, Ann Arbor, Michigan, USA.
Daniela MassiDepartment of Health Sciences, Section of Anatomic Pathology, University of Florence, Florence, Italy.
Jane MessinaDepartments of Pathology and Cutaneous Oncology, Moffitt Cancer Center, Tampa, Florida, USA.
Daniela Mihic-ProbstInstitute for Pathology and Molecular Pathology, University Hospital Zurich, Zurich, Switzerland.
Douglas C ParkerDepartments of Pathology and Dermatology, Emory University School of Medicine, Atlanta, Georgia, USA.
Margaret RedpathDepartment of Pathology, McGill University, Quebec, Canada.
Michael R SargenDivision of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Rockville, Maryland, USA.ORCID https://orcid.org/0000-0003-1039-2522
Richard A ScolyerMelanoma Institute Australia, The University of Sydney, Sydney, Australia.ORCID https://orcid.org/0000-0002-8991-0013
Christopher R SheaDepartment of Medicine, Section of Dermatology, University of Chicago, Chicago, Illinois, USA.ORCID https://orcid.org/0000-0002-3780-8113
Michael TetzlaffDermatopathology and Oral Pathology Unit, Departments of Pathology and Dermatology, University of California, San Francisco, California, USA.
Carlos Torres-CabalaDepartments of Pathology and Dermatology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.ORCID https://orcid.org/0000-0001-7422-0661
Victor TronLifelabs and Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario, Canada.
Xiaowei XuDepartments of Pathology and Dermatology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Iwei YehDepartments of Dermatology and Pathology, University of California, San Francisco, California, USA.
Sook Jung YunDepartment of Dermatology, Chonnam National University Medical School, Gwangju, Korea.ORCID https://orcid.org/0000-0003-4229-5831
Artur ZembowiczDermatopathology Consultations LLC, Lahey Clinic and Tufts Medical School, Boston, Massachusetts, USA.
Pedram GeramiDepartment of Dermatology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA.ORCID https://orcid.org/0000-0002-6194-1037

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

backgroundNext-generation sequencing (NGS) is becoming more commonly used for diagnosis in dermatopathology. It's critical to appraise its efficacy and limitations. Distinguishing benign deep penetrating nevi (DPN) from deep penetrating like-melanoma (DPN-M) is a challenging diagnostic scenario even for experienced dermatopathologists.

methodsWe sent a two-phase survey (pre-and postgenomics) to 32 experienced dermatopathologists to evaluate 39 diagnostically challenging cases from the DPN/WNT-activated family of melanocytic neoplasms.

resultsWith NGS data, interobserver agreement improved from 0.41 to 0.51 (p < 0.0001) in distinguishing DPN-M from nonmelanoma cases. Overall diagnostic accuracy improved, mostly driven by a 16% increase in accurate diagnosis of DPN-M. However, in two cases, the inclusion of genomics shifted the majority vote from a correct to an incorrect diagnosis. A total of 218 diagnostic changes occurred between Survey 1 and 2. Among the changes, 132 votes moved toward the correct diagnosis while 86 moved toward an incorrect diagnosis. The shift in voting which resulted in improved diagnostic accuracy was statistically significant (p = 0.0001).

conclusionsNGS has the potential to improve interobserver agreement and diagnostic accuracy. We provide guidance on the utilization of bioinformatic data to maximize its benefits and improve diagnostic accuracy and interobserver agreement.

Indexed as

High-Throughput Nucleotide SequencingMelanomaSkin NeoplasmsDiagnosis, DifferentialFemaleHumansMaleObserver Variationdeep penetrating melanocytic tumor of uncertain malignant potentialdeep penetrating nevusdeep penetrating nevus‐like melanomaplexiform melanomaWNT‐activated Melanocytoma

Identifiers

PMID41436418
PMCPMC12867587

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.