Evidence map›Paper›PMID 41433062›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Arg-Tyr cation-π interactions drive phase separation and β-sheet assembly in native spider dragline silk.

Hannah R Johnson, Kevin Chalek, Nesreen Elathram, Andy T Chau, Anikin Rae Domingo, Julian E Aldana, Hieu Nguyen, Alexia de Loera, Brianna A Duarte, Lado Shapakidze and 4 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Hannah R Johnson *Department of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.ORCID 0009-0009-0729-0788
Kevin Chalek *Department of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.ORCID 0000-0002-6189-7769
Nesreen ElathramDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0001-7570-0616
Andy T ChauDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.
Anikin Rae DomingoDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.
Julian E AldanaDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.
Hieu NguyenDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.
Alexia de LoeraDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.
Brianna A DuarteDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.
Lado ShapakidzeDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.ORCID 0009-0007-4802-9434
David OnofreiDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.ORCID 0000-0002-6386-0716
Galia T DebelouchinaDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, CA 92093.ORCID 0000-0001-6775-9415
Christian D LorenzDepartment of Engineering, King's College London, London WC2R 2LS, United Kingdom.ORCID 0000-0003-1028-4804
Gregory P HollandDepartment of Chemistry and Biochemistry, San Diego State University, San Diego, CA 92182-1030.ORCID 0000-0003-3062-3391

Funding

Structural biology of chromatin in vitro and in cellsR35GM138382 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Galia Debelouchina · 2020 to 2026
$2.8M
DOD | AF | AMC | AFRL | Air Force Office of Scientific Research (AFOSR) FA9550-23-1-0616HHS | NIH | National Institute of General Medical Sciences (NIGMS) NIH R35 GM138382NIGMS NIH HHS R35 GM138382
6 · The paper itself

Abstract

Liquid-liquid phase separation (LLPS) is a fundamental principle of protein organization in intrinsically disordered proteins (IDPs) and biomaterials, yet the residue-level interactions that link condensation to structural ordering remain poorly defined. In spider dragline silk, LLPS is believed to initiate the transition from soluble spidroin dope into β-sheet-rich fibers that provide exceptional toughness, yet how sequence-specific motifs govern this process has been unclear. Here, we combine isotope-edited solution NMR, dynamic nuclear polarization (DNP)-enhanced solid-state NMR, molecular dynamics simulations, and AlphaFold3 modeling to define the molecular role of arginine and tyrosine in

Indexed as

ArginineFibroinsSilkSpidersTyrosineAnimalsCationsIntrinsically Disordered ProteinsMagnetic Resonance SpectroscopyMolecular Dynamics SimulationPhase SeparationProtein Conformation, beta-StrandArginineCationsFibroinsIntrinsically Disordered ProteinsSilkTyrosinecation–π interactionsliquid–liquid phase separation (LLPS)solid-state NMRspider silk proteinsβ-sheet assembly

Identifiers

PMID41433062
PMCPMC12772222

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.