Evidence map›Paper›PMID 41430299›Full record

ArticleCell communication and signaling : CCS2025

Multi-omics reveals FAT10 as an immunometabolic survival factor rewiring global metabolism in cancer.

Jun Yan Loh, Jianhong Ching, Jean-Paul Kovalik, Shuaichen Liu, Lee Jin Lim, Samuel S Chong, Caroline G L Lee

Abstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jun Yan LohDepartment of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, 8 Medical Drive, Singapore, 117596, Singapore.
Jianhong ChingCardiovascular and Metabolic Disorders Programme, Duke-NUS Medical School, 8 College Road, Singapore, 169857, Singapore.
Jean-Paul KovalikCardiovascular and Metabolic Disorders Programme, Duke-NUS Medical School, 8 College Road, Singapore, 169857, Singapore.
Shuaichen LiuDepartment of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, 8 Medical Drive, Singapore, 117596, Singapore.
Lee Jin LimDepartment of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, 8 Medical Drive, Singapore, 117596, Singapore.
Samuel S ChongDepartment of Pediatrics, Yong Loo Lin School of Medicine, National University of Singapore, 1E Kent Ridge Road, Singapore, 119228, Singapore.
Caroline G L LeeDepartment of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, 8 Medical Drive, Singapore, 117596, Singapore. bchleec@nus.edu.sg.

Funding

Ministry of Education - Singapore AcRF Tier 1 FRC (T1-2015 Apr-05)National Cancer Centre of Singapore NCCSPG-YR201S-JAN-9
6 · The paper itself

Abstract

backgroundFAT10 is an inflammation-induced oncogene highly overexpressed across multiple cancers. As a ubiquitin-like protein, it regulates interacting proteins by destabilizing, stabilizing or delocalizing them. Despite its extensive influence on targets from various cellular pathways, prior studies largely focused on interrogating individual protein interactions, limiting our understanding of FAT10’s broader oncogenic role.

methodsHere, we adopt a novel systems-level approach to elucidate FAT10’s function by integrating quantitative proteomics, interactomics and metabolomics analyses in a cancer cell model. Biochemical methods including western blot, Seahorse Assay and Oil-Red-O staining were used to validate FAT10’s impact on protein expression and metabolism in metabolism-related pathways. We further investigated the effect of metabolic stress on FAT10 expression by modulating metabolite levels or treatment with metabolic pathway inhibitors. FAT10-induced survival under metabolic stress and inflammation was assessed using Cell Counting Kit-8 assay and cleaved caspase 3 quantification.

resultsWe demonstrate that FAT10 prominently regulates metabolism-related pathways, coordinately upregulating those involved in energy uptake, production and storage (glycolysis, lipogenesis and β-oxidation), while downregulating those in energy consumption (pentose phosphate pathway, nucleotide metabolism, transcription, translation and cell cycle) and truncating the TCA cycle. These changes indicate a potential shift from a replication-oriented to a survival-oriented cellular state. Correspondingly, metabolic stress promoted inflammation-induced FAT10 transcription. FAT10 consequently enhanced cancer cell survival under concurrent metabolic stress and inflammation.

conclusionsOverall, our findings establish FAT10 as an immunometabolic survival factor that responds to metabolic stress under inflammation, propagating global metabolic changes to alleviate this stress and promote cancer survival by potentially orchestrating a fundamental shift in cellular priorities from replication to survival. Through our systems-level perspective on FAT10's regulatory activities, we contextualize its previously disparate functions and reveal a potential blueprint for cellular survival programming of metabolism-related pathways during inflammation and stress.

Indexed as

NeoplasmsUbiquitinsCell Line, TumorCell SurvivalHumansInflammationMetabolic ReprogrammingMultiomicsProteomicsUBD protein, humanUbiquitinsCancerFAT10ImmunometabolismInflammationMulti-omicsUbiquitin-like modifier

Identifiers

PMID41430299
PMCPMC12723956

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.